Information for motif18


Reverse Opposite:

p-value:1e-24
log p-value:-5.560e+01
Information Content per bp:1.446
Number of Target Sequences with motif30.0
Percentage of Target Sequences with motif0.12%
Number of Background Sequences with motif3.0
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets112.0 +/- 53.3bp
Average Position of motif in Background53.0 +/- 24.3bp
Strand Bias (log2 ratio + to - strand density)-0.2
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0181.1_Spdef_2/Jaspar

Match Rank:1
Score:0.62
Offset:1
Orientation:reverse strand
Alignment:GCTTGTAGGA-------
-CTACTAGGATGTNNTN

MA0164.1_Nr2e3/Jaspar

Match Rank:2
Score:0.57
Offset:-2
Orientation:reverse strand
Alignment:--GCTTGTAGGA
AAGCTTG-----

MA0137.3_STAT1/Jaspar

Match Rank:3
Score:0.56
Offset:1
Orientation:forward strand
Alignment:GCTTGTAGGA--
-TTTCCAGGAAA

MA0518.1_Stat4/Jaspar

Match Rank:4
Score:0.56
Offset:1
Orientation:forward strand
Alignment:GCTTGTAGGA-----
-TTTCCAGGAAATGG

MA0463.1_Bcl6/Jaspar

Match Rank:5
Score:0.55
Offset:-2
Orientation:reverse strand
Alignment:--GCTTGTAGGA--
NGCTTTCTAGGAAN

POL010.1_DCE_S_III/Jaspar

Match Rank:6
Score:0.54
Offset:-1
Orientation:reverse strand
Alignment:-GCTTGTAGGA
NGCTN------

MA0006.1_Arnt::Ahr/Jaspar

Match Rank:7
Score:0.54
Offset:-1
Orientation:forward strand
Alignment:-GCTTGTAGGA
TGCGTG-----

MA0144.2_STAT3/Jaspar

Match Rank:8
Score:0.54
Offset:1
Orientation:forward strand
Alignment:GCTTGTAGGA--
-CTTCTGGGAAA

MA0519.1_Stat5a::Stat5b/Jaspar

Match Rank:9
Score:0.53
Offset:2
Orientation:reverse strand
Alignment:GCTTGTAGGA---
--TTCTTGGAAAN

STAT4(Stat)/CD4-Stat4-ChIP-Seq(GSE22104)/Homer

Match Rank:10
Score:0.52
Offset:0
Orientation:forward strand
Alignment:GCTTGTAGGA--
NTTTCCNGGAAA