| p-value: | 1e-23 |
| log p-value: | -5.390e+01 |
| Information Content per bp: | 1.846 |
| Number of Target Sequences with motif | 116.0 |
| Percentage of Target Sequences with motif | 0.45% |
| Number of Background Sequences with motif | 38.0 |
| Percentage of Background Sequences with motif | 0.15% |
| Average Position of motif in Targets | 96.6 +/- 54.2bp |
| Average Position of motif in Background | 107.6 +/- 58.4bp |
| Strand Bias (log2 ratio + to - strand density) | 0.4 |
| Multiplicity (# of sites on avg that occur together) | 1.01 |
| Motif File: | file (matrix)
reverse opposite |
| PDF Format Logos: | forward logo
reverse opposite |
Pdx1(Homeobox)/Islet-Pdx1-ChIP-Seq(SRA008281)/Homer
| Match Rank: | 1 |
| Score: | 0.69
| | Offset: | 1
| | Orientation: | reverse strand |
| Alignment: | CTGATAGCTG-
-TGATTGATGA |
|
|
|
HOXA2(Homeobox)/mES-Hoxa2-ChIP-Seq(Donaldson et al.)/Homer
| Match Rank: | 2 |
| Score: | 0.65
| | Offset: | 0
| | Orientation: | reverse strand |
| Alignment: | CTGATAGCTG--
ATGATKGATGRC |
|
|
|
MA0070.1_PBX1/Jaspar
| Match Rank: | 3 |
| Score: | 0.63
| | Offset: | -1
| | Orientation: | reverse strand |
| Alignment: | -CTGATAGCTG-
TTTGATTGATGN |
|
|
|
MA0594.1_Hoxa9/Jaspar
| Match Rank: | 4 |
| Score: | 0.62
| | Offset: | 1
| | Orientation: | reverse strand |
| Alignment: | CTGATAGCTG--
-TGATTTATGGC |
|
|
|
PB0126.1_Gata5_2/Jaspar
| Match Rank: | 5 |
| Score: | 0.61
| | Offset: | -3
| | Orientation: | reverse strand |
| Alignment: | ---CTGATAGCTG----
NNNCTGATATCTCNNNN |
|
|
|
MA0498.1_Meis1/Jaspar
| Match Rank: | 6 |
| Score: | 0.60
| | Offset: | -6
| | Orientation: | reverse strand |
| Alignment: | ------CTGATAGCTG
NNNTGAGTGACAGCT- |
|
|
|
Hoxb4(Homeobox)/ES-Hoxb4-ChIP-Seq(GSE34014)/Homer
| Match Rank: | 7 |
| Score: | 0.60
| | Offset: | 1
| | Orientation: | forward strand |
| Alignment: | CTGATAGCTG---
-TGATTRATGGCY |
|
|
|
MA0060.2_NFYA/Jaspar
| Match Rank: | 8 |
| Score: | 0.59
| | Offset: | -6
| | Orientation: | forward strand |
| Alignment: | ------CTGATAGCTG--
AGAGTGCTGATTGGTCCA |
|
|
|
PB0144.1_Lef1_2/Jaspar
| Match Rank: | 9 |
| Score: | 0.59
| | Offset: | -3
| | Orientation: | reverse strand |
| Alignment: | ---CTGATAGCTG---
NNANTGATTGATNTTN |
|
|
|
PH0169.1_Tgif1/Jaspar
| Match Rank: | 10 |
| Score: | 0.59
| | Offset: | -4
| | Orientation: | forward strand |
| Alignment: | ----CTGATAGCTG---
GATATTGACAGCTGCGT |
|
|
|
