Information for motif22


Reverse Opposite:

p-value:1e-12
log p-value:-2.984e+01
Information Content per bp:1.530
Number of Target Sequences with motif32.0
Percentage of Target Sequences with motif0.12%
Number of Background Sequences with motif6.6
Percentage of Background Sequences with motif0.03%
Average Position of motif in Targets80.4 +/- 62.9bp
Average Position of motif in Background92.8 +/- 55.7bp
Strand Bias (log2 ratio + to - strand density)0.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

MA0124.1_NKX3-1/Jaspar

Match Rank:1
Score:0.64
Offset:-2
Orientation:reverse strand
Alignment:--AGTATGCG
TAAGTAT---

MA0032.1_FOXC1/Jaspar

Match Rank:2
Score:0.64
Offset:-4
Orientation:forward strand
Alignment:----AGTATGCG
GGTAAGTA----

PB0024.1_Gcm1_1/Jaspar

Match Rank:3
Score:0.60
Offset:-1
Orientation:reverse strand
Alignment:-AGTATGCG-------
NNNNATGCGGGTNNNN

NRF1/Promoter/Homer

Match Rank:4
Score:0.58
Offset:-1
Orientation:reverse strand
Alignment:-AGTATGCG---
GCGCATGCGCAC

PH0148.1_Pou3f3/Jaspar

Match Rank:5
Score:0.58
Offset:-3
Orientation:reverse strand
Alignment:---AGTATGCG------
TNNATTATGCATANNTT

ETS:RUNX/Jurkat-RUNX1-ChIP-Seq(GSE17954)/Homer

Match Rank:6
Score:0.56
Offset:-2
Orientation:forward strand
Alignment:--AGTATGCG--
ACAGGATGTGGT

PH0145.1_Pou2f3/Jaspar

Match Rank:7
Score:0.55
Offset:-1
Orientation:forward strand
Alignment:-AGTATGCG-------
TTGTATGCAAATTAGA

MA0033.1_FOXL1/Jaspar

Match Rank:8
Score:0.55
Offset:2
Orientation:reverse strand
Alignment:AGTATGCG--
--TATGTNTA

PH0144.1_Pou2f2/Jaspar

Match Rank:9
Score:0.55
Offset:-1
Orientation:forward strand
Alignment:-AGTATGCG-------
TTGTATGCAAATTAGA

NRF1(NRF)/MCF7-NRF1-ChIP-Seq(Unpublished)/Homer

Match Rank:10
Score:0.54
Offset:-1
Orientation:reverse strand
Alignment:-AGTATGCG---
GCGCATGCGCAG