Information for motif3


Reverse Opposite:

p-value:1e-471
log p-value:-1.086e+03
Information Content per bp:1.729
Number of Target Sequences with motif1203.0
Percentage of Target Sequences with motif4.66%
Number of Background Sequences with motif218.6
Percentage of Background Sequences with motif0.85%
Average Position of motif in Targets97.7 +/- 47.5bp
Average Position of motif in Background99.8 +/- 57.3bp
Strand Bias (log2 ratio + to - strand density)-0.2
Multiplicity (# of sites on avg that occur together)1.01
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

BORIS(Zf)/K562-CTCFL-ChIP-Seq(GSE32465)/Homer

Match Rank:1
Score:0.93
Offset:-7
Orientation:forward strand
Alignment:-------GCCMCCTASTGG-
CNNBRGCGCCCCCTGSTGGC

MA0139.1_CTCF/Jaspar

Match Rank:2
Score:0.92
Offset:-4
Orientation:reverse strand
Alignment:----GCCMCCTASTGG---
TAGCGCCCCCTGGTGGCCA

CTCF(Zf)/CD4+-CTCF-ChIP-Seq(Barski et al.)/Homer

Match Rank:3
Score:0.91
Offset:-5
Orientation:forward strand
Alignment:-----GCCMCCTASTGG---
ANAGTGCCACCTGGTGGCCA

Unknown-ESC-element/mES-Nanog-ChIP-Seq(GSE11724)/Homer

Match Rank:4
Score:0.66
Offset:1
Orientation:reverse strand
Alignment:GCCMCCTASTGG-
-CCCCCTGCTGTG

NeuroD1(bHLH)/Islet-NeuroD1-ChIP-Seq(GSE30298)/Homer

Match Rank:5
Score:0.64
Offset:0
Orientation:forward strand
Alignment:GCCMCCTASTGG
GCCATCTGTT--

MA0461.1_Atoh1/Jaspar

Match Rank:6
Score:0.63
Offset:0
Orientation:reverse strand
Alignment:GCCMCCTASTGG
GCCATCTG----

PB0076.1_Sp4_1/Jaspar

Match Rank:7
Score:0.62
Offset:-6
Orientation:forward strand
Alignment:------GCCMCCTASTGG
GGTCCCGCCCCCTTCTC-

PB0101.1_Zic1_1/Jaspar

Match Rank:8
Score:0.57
Offset:0
Orientation:reverse strand
Alignment:GCCMCCTASTGG--
CCCCCCCGGGGGNN

E2A-nearPU.1(HLH)/Bcell-PU.1-ChIP-Seq(GSE21512)/Homer

Match Rank:9
Score:0.57
Offset:0
Orientation:forward strand
Alignment:GCCMCCTASTGG
NNCACCTGNN--

MA0116.1_Zfp423/Jaspar

Match Rank:10
Score:0.57
Offset:0
Orientation:forward strand
Alignment:GCCMCCTASTGG---
GGCACCCAGGGGTGC