Information for motif11


Reverse Opposite:

p-value:1e-43
log p-value:-9.952e+01
Information Content per bp:1.840
Number of Target Sequences with motif226.0
Percentage of Target Sequences with motif3.69%
Number of Background Sequences with motif62.1
Percentage of Background Sequences with motif1.26%
Average Position of motif in Targets103.1 +/- 54.6bp
Average Position of motif in Background99.3 +/- 70.0bp
Strand Bias (log2 ratio + to - strand density)0.2
Multiplicity (# of sites on avg that occur together)1.05
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

MA0599.1_KLF5/Jaspar

Match Rank:1
Score:0.90
Offset:-1
Orientation:reverse strand
Alignment:-GGGTGGGGCC
GGGGNGGGGC-

MA0039.2_Klf4/Jaspar

Match Rank:2
Score:0.90
Offset:-1
Orientation:forward strand
Alignment:-GGGTGGGGCC
TGGGTGGGGC-

KLF5(Zf)/LoVo-KLF5-ChIP-Seq(GSE49402)/Homer

Match Rank:3
Score:0.89
Offset:-1
Orientation:forward strand
Alignment:-GGGTGGGGCC
DGGGYGKGGC-

MA0493.1_Klf1/Jaspar

Match Rank:4
Score:0.86
Offset:-1
Orientation:reverse strand
Alignment:-GGGTGGGGCC
TGGGTGTGGCN

EKLF(Zf)/Erythrocyte-Klf1-ChIP-Seq(GSE20478)/Homer

Match Rank:5
Score:0.86
Offset:-2
Orientation:forward strand
Alignment:--GGGTGGGGCC
NTGGGTGTGGCC

Klf4(Zf)/mES-Klf4-ChIP-Seq(GSE11431)/Homer

Match Rank:6
Score:0.84
Offset:-1
Orientation:reverse strand
Alignment:-GGGTGGGGCC
TGGGTGTGGC-

POL003.1_GC-box/Jaspar

Match Rank:7
Score:0.81
Offset:-3
Orientation:forward strand
Alignment:---GGGTGGGGCC-
AGGGGGCGGGGCTG

Maz(Zf)/HepG2-Maz-ChIP-Seq(GSE31477)/Homer

Match Rank:8
Score:0.81
Offset:0
Orientation:forward strand
Alignment:GGGTGGGGCC
GGGGGGGG--

Sp1(Zf)/Promoter/Homer

Match Rank:9
Score:0.81
Offset:-2
Orientation:reverse strand
Alignment:--GGGTGGGGCC
GGGGGCGGGGCC

MA0079.3_SP1/Jaspar

Match Rank:10
Score:0.80
Offset:-2
Orientation:reverse strand
Alignment:--GGGTGGGGCC
GGGGGCGGGGC-