Information for motif13


Reverse Opposite:

p-value:1e-41
log p-value:-9.608e+01
Information Content per bp:1.819
Number of Target Sequences with motif38.0
Percentage of Target Sequences with motif0.62%
Number of Background Sequences with motif0.0
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets99.6 +/- 55.0bp
Average Position of motif in Background0.0 +/- 0.0bp
Strand Bias (log2 ratio + to - strand density)0.6
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0029.1_Hic1_1/Jaspar

Match Rank:1
Score:0.62
Offset:-4
Orientation:forward strand
Alignment:----GGCCACCCTCCT
ACTATGCCAACCTACC

MA0516.1_SP2/Jaspar

Match Rank:2
Score:0.62
Offset:0
Orientation:forward strand
Alignment:GGCCACCCTCCT---
GCCCCGCCCCCTCCC

GLI3(Zf)/GLI3-ChIP-Chip(GSE11077)/Homer

Match Rank:3
Score:0.60
Offset:-1
Orientation:reverse strand
Alignment:-GGCCACCCTCCT
GGACCACCCACG-

PB0097.1_Zfp281_1/Jaspar

Match Rank:4
Score:0.57
Offset:-1
Orientation:forward strand
Alignment:-GGCCACCCTCCT--
TCCCCCCCCCCCCCC

Sp1(Zf)/Promoter/Homer

Match Rank:5
Score:0.56
Offset:0
Orientation:forward strand
Alignment:GGCCACCCTCCT
GGCCCCGCCCCC

Maz(Zf)/HepG2-Maz-ChIP-Seq(GSE31477)/Homer

Match Rank:6
Score:0.56
Offset:3
Orientation:reverse strand
Alignment:GGCCACCCTCCT
---CCCCCCCC-

MA0079.3_SP1/Jaspar

Match Rank:7
Score:0.56
Offset:0
Orientation:forward strand
Alignment:GGCCACCCTCCT
GCCCCGCCCCC-

PB0196.1_Zbtb7b_2/Jaspar

Match Rank:8
Score:0.53
Offset:-5
Orientation:forward strand
Alignment:-----GGCCACCCTCCT
CATAAGACCACCATTAC

Klf4(Zf)/mES-Klf4-ChIP-Seq(GSE11431)/Homer

Match Rank:9
Score:0.53
Offset:1
Orientation:forward strand
Alignment:GGCCACCCTCCT
-GCCACACCCA-

PB0039.1_Klf7_1/Jaspar

Match Rank:10
Score:0.53
Offset:-2
Orientation:forward strand
Alignment:--GGCCACCCTCCT--
TCGACCCCGCCCCTAT