Information for motif15


Reverse Opposite:

p-value:1e-40
log p-value:-9.238e+01
Information Content per bp:1.653
Number of Target Sequences with motif63.0
Percentage of Target Sequences with motif1.03%
Number of Background Sequences with motif5.8
Percentage of Background Sequences with motif0.12%
Average Position of motif in Targets87.7 +/- 55.9bp
Average Position of motif in Background67.3 +/- 39.2bp
Strand Bias (log2 ratio + to - strand density)0.8
Multiplicity (# of sites on avg that occur together)1.03
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

POL013.1_MED-1/Jaspar

Match Rank:1
Score:0.66
Offset:3
Orientation:forward strand
Alignment:CAGGCTCCCTAG
---GCTCCG---

MA0056.1_MZF1_1-4/Jaspar

Match Rank:2
Score:0.61
Offset:5
Orientation:reverse strand
Alignment:CAGGCTCCCTAG
-----TCCCCA-

PB0203.1_Zfp691_2/Jaspar

Match Rank:3
Score:0.60
Offset:-3
Orientation:forward strand
Alignment:---CAGGCTCCCTAG--
TACGAGACTCCTCTAAC

POL008.1_DCE_S_I/Jaspar

Match Rank:4
Score:0.57
Offset:3
Orientation:forward strand
Alignment:CAGGCTCCCTAG
---GCTTCC---

PB0151.1_Myf6_2/Jaspar

Match Rank:5
Score:0.56
Offset:-5
Orientation:forward strand
Alignment:-----CAGGCTCCCTAG
AGCAACAGCCGCACC--

PB0154.1_Osr1_2/Jaspar

Match Rank:6
Score:0.56
Offset:-1
Orientation:forward strand
Alignment:-CAGGCTCCCTAG---
ACATGCTACCTAATAC

EBF(EBF)/proBcell-EBF-ChIP-Seq(GSE21978)/Homer

Match Rank:7
Score:0.55
Offset:3
Orientation:forward strand
Alignment:CAGGCTCCCTAG---
---NGTCCCNNGGGA

POL006.1_BREu/Jaspar

Match Rank:8
Score:0.55
Offset:2
Orientation:reverse strand
Alignment:CAGGCTCCCTAG
--GGCGCGCT--

POL009.1_DCE_S_II/Jaspar

Match Rank:9
Score:0.54
Offset:-2
Orientation:reverse strand
Alignment:--CAGGCTCCCTAG
CACAGN--------

PB0052.1_Plagl1_1/Jaspar

Match Rank:10
Score:0.54
Offset:-3
Orientation:forward strand
Alignment:---CAGGCTCCCTAG-
TTGGGGGCGCCCCTAG