Information for motif22


Reverse Opposite:

p-value:1e-30
log p-value:-6.945e+01
Information Content per bp:1.829
Number of Target Sequences with motif30.0
Percentage of Target Sequences with motif0.49%
Number of Background Sequences with motif0.0
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets111.7 +/- 55.0bp
Average Position of motif in Background0.0 +/- 0.0bp
Strand Bias (log2 ratio + to - strand density)-0.2
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

MA0131.1_HINFP/Jaspar

Match Rank:1
Score:0.64
Offset:-4
Orientation:forward strand
Alignment:----GTCCGCGTCG
TAACGTCCGC----

PB0179.1_Sp100_2/Jaspar

Match Rank:2
Score:0.60
Offset:3
Orientation:forward strand
Alignment:GTCCGCGTCG--------
---TCCGTCGCTTAAAAG

PB0131.1_Gmeb1_2/Jaspar

Match Rank:3
Score:0.56
Offset:-2
Orientation:forward strand
Alignment:--GTCCGCGTCG----
TGGGCGACGTCGTTAA

MA0117.1_Mafb/Jaspar

Match Rank:4
Score:0.56
Offset:-2
Orientation:reverse strand
Alignment:--GTCCGCGTCG
NCGTCAGC----

PB0199.1_Zfp161_2/Jaspar

Match Rank:5
Score:0.55
Offset:-5
Orientation:reverse strand
Alignment:-----GTCCGCGTCG
NNGCNCTGCGCGGC-

MA0056.1_MZF1_1-4/Jaspar

Match Rank:6
Score:0.54
Offset:1
Orientation:reverse strand
Alignment:GTCCGCGTCG
-TCCCCA---

PB0200.1_Zfp187_2/Jaspar

Match Rank:7
Score:0.54
Offset:-2
Orientation:forward strand
Alignment:--GTCCGCGTCG----
GAGCCCTTGTCCCTAA

PB0011.1_Ehf_1/Jaspar

Match Rank:8
Score:0.53
Offset:-4
Orientation:reverse strand
Alignment:----GTCCGCGTCG-
TNACTTCCGGNTNNN

MA0146.2_Zfx/Jaspar

Match Rank:9
Score:0.53
Offset:-2
Orientation:reverse strand
Alignment:--GTCCGCGTCG--
CAGGCCNNGGCCNN

n-Myc(HLH)/mES-nMyc-ChIP-Seq(GSE11431)/Homer

Match Rank:10
Score:0.52
Offset:2
Orientation:reverse strand
Alignment:GTCCGCGTCG--
--CCACGTGGNN