Information for motif25


Reverse Opposite:

p-value:1e-26
log p-value:-6.016e+01
Information Content per bp:1.494
Number of Target Sequences with motif34.0
Percentage of Target Sequences with motif0.56%
Number of Background Sequences with motif2.1
Percentage of Background Sequences with motif0.04%
Average Position of motif in Targets109.6 +/- 49.9bp
Average Position of motif in Background111.3 +/- 40.9bp
Strand Bias (log2 ratio + to - strand density)0.6
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0134.1_Hnf4a_2/Jaspar

Match Rank:1
Score:0.69
Offset:-1
Orientation:forward strand
Alignment:-TATATAGTCC-----
GGCAAAAGTCCAATAA

PB0173.1_Sox21_2/Jaspar

Match Rank:2
Score:0.68
Offset:-2
Orientation:forward strand
Alignment:--TATATAGTCC-----
AATCAATTGTTCCGCTA

PB0072.1_Sox5_1/Jaspar

Match Rank:3
Score:0.68
Offset:-2
Orientation:reverse strand
Alignment:--TATATAGTCC----
NNTTTATTGTTCTNNN

PB0063.1_Sox13_1/Jaspar

Match Rank:4
Score:0.67
Offset:-2
Orientation:reverse strand
Alignment:--TATATAGTCC----
AANTTATTGTTCTNNA

PB0065.1_Sox15_1/Jaspar

Match Rank:5
Score:0.64
Offset:-3
Orientation:reverse strand
Alignment:---TATATAGTCC----
ANNTCTATTGTTCNNNA

PB0183.1_Sry_2/Jaspar

Match Rank:6
Score:0.62
Offset:-2
Orientation:reverse strand
Alignment:--TATATAGTCC-----
CNNNTATTGTTCNNNNN

PB0074.1_Sox8_1/Jaspar

Match Rank:7
Score:0.62
Offset:-3
Orientation:forward strand
Alignment:---TATATAGTCC----
GTATCTATTGTTCTTTA

MA0078.1_Sox17/Jaspar

Match Rank:8
Score:0.61
Offset:0
Orientation:forward strand
Alignment:TATATAGTCC
CTCATTGTC-

PB0070.1_Sox30_1/Jaspar

Match Rank:9
Score:0.60
Offset:-3
Orientation:reverse strand
Alignment:---TATATAGTCC---
ANNTCCATTGTTCNNN

PB0073.1_Sox7_1/Jaspar

Match Rank:10
Score:0.59
Offset:-6
Orientation:reverse strand
Alignment:------TATATAGTCC------
TNNANNTCTATTGTTNTNNANN