| p-value: | 1e-23 |
| log p-value: | -5.329e+01 |
| Information Content per bp: | 1.963 |
| Number of Target Sequences with motif | 41.0 |
| Percentage of Target Sequences with motif | 0.67% |
| Number of Background Sequences with motif | 4.2 |
| Percentage of Background Sequences with motif | 0.08% |
| Average Position of motif in Targets | 86.1 +/- 55.8bp |
| Average Position of motif in Background | 69.1 +/- 60.5bp |
| Strand Bias (log2 ratio + to - strand density) | -0.3 |
| Multiplicity (# of sites on avg that occur together) | 1.00 |
| Motif File: | file (matrix)
reverse opposite |
| PDF Format Logos: | forward logo
reverse opposite |
PH0169.1_Tgif1/Jaspar
| Match Rank: | 1 |
| Score: | 0.67
| | Offset: | -5
| | Orientation: | forward strand |
| Alignment: | -----TGACTGCG----
GATATTGACAGCTGCGT |
|
|
|
MA0089.1_NFE2L1::MafG/Jaspar
| Match Rank: | 2 |
| Score: | 0.65
| | Offset: | -2
| | Orientation: | forward strand |
| Alignment: | --TGACTGCG
CATGAC---- |
|
|
|
MA0067.1_Pax2/Jaspar
| Match Rank: | 3 |
| Score: | 0.64
| | Offset: | -3
| | Orientation: | reverse strand |
| Alignment: | ---TGACTGCG
NCGTGACN--- |
|
|
|
MA0498.1_Meis1/Jaspar
| Match Rank: | 4 |
| Score: | 0.64
| | Offset: | -7
| | Orientation: | reverse strand |
| Alignment: | -------TGACTGCG
NNNTGAGTGACAGCT |
|
|
|
Pax8(Paired/Homeobox)/Thyroid-Pax8-ChIP-Seq(GSE26938)/Homer
| Match Rank: | 5 |
| Score: | 0.62
| | Offset: | -8
| | Orientation: | forward strand |
| Alignment: | --------TGACTGCG
GTCATGCHTGRCTGS- |
|
|
|
PH0170.1_Tgif2/Jaspar
| Match Rank: | 6 |
| Score: | 0.61
| | Offset: | -4
| | Orientation: | reverse strand |
| Alignment: | ----TGACTGCG----
GTATTGACAGCTNNTT |
|
|
|
Smad3(MAD)/NPC-Smad3-ChIP-Seq(GSE36673)/Homer
| Match Rank: | 7 |
| Score: | 0.60
| | Offset: | -1
| | Orientation: | forward strand |
| Alignment: | -TGACTGCG
TWGTCTGV- |
|
|
|
Smad2(MAD)/ES-SMAD2-ChIP-Seq(GSE29422)/Homer
| Match Rank: | 8 |
| Score: | 0.60
| | Offset: | -1
| | Orientation: | forward strand |
| Alignment: | -TGACTGCG
CTGTCTGG- |
|
|
|
PH0141.1_Pknox2/Jaspar
| Match Rank: | 9 |
| Score: | 0.60
| | Offset: | -4
| | Orientation: | reverse strand |
| Alignment: | ----TGACTGCG----
NNATTGACAGGTGCTT |
|
|
|
PH0158.1_Rhox11_2/Jaspar
| Match Rank: | 10 |
| Score: | 0.60
| | Offset: | -5
| | Orientation: | reverse strand |
| Alignment: | -----TGACTGCG----
TCNCTTTACAGCGNNNT |
|
|
|
