Information for motif3


Reverse Opposite:

p-value:1e-80
log p-value:-1.843e+02
Information Content per bp:1.870
Number of Target Sequences with motif682.0
Percentage of Target Sequences with motif11.14%
Number of Background Sequences with motif248.2
Percentage of Background Sequences with motif5.03%
Average Position of motif in Targets99.1 +/- 52.2bp
Average Position of motif in Background107.6 +/- 58.3bp
Strand Bias (log2 ratio + to - strand density)-0.0
Multiplicity (# of sites on avg that occur together)1.09
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

MA0090.1_TEAD1/Jaspar

Match Rank:1
Score:0.91
Offset:-3
Orientation:reverse strand
Alignment:---TGGAATGT-
CNGAGGAATGTG

TEAD(TEA)/Fibroblast-PU.1-ChIP-Seq(Unpublished)/Homer

Match Rank:2
Score:0.91
Offset:-2
Orientation:forward strand
Alignment:--TGGAATGT
NCTGGAATGC

TEAD4(TEA)/Tropoblast-Tead4-ChIP-Seq(GSE37350)/Homer

Match Rank:3
Score:0.90
Offset:-2
Orientation:forward strand
Alignment:--TGGAATGT
CCWGGAATGY

PB0170.1_Sox17_2/Jaspar

Match Rank:4
Score:0.67
Offset:-5
Orientation:reverse strand
Alignment:-----TGGAATGT----
NTTNTATGAATGTGNNC

PB0098.1_Zfp410_1/Jaspar

Match Rank:5
Score:0.67
Offset:-5
Orientation:forward strand
Alignment:-----TGGAATGT----
TATTATGGGATGGATAA

PB0178.1_Sox8_2/Jaspar

Match Rank:6
Score:0.65
Offset:-6
Orientation:reverse strand
Alignment:------TGGAATGT
NNTNTCATGAATGT

MA0081.1_SPIB/Jaspar

Match Rank:7
Score:0.63
Offset:-2
Orientation:forward strand
Alignment:--TGGAATGT
AGAGGAA---

NFAT(RHD)/Jurkat-NFATC1-ChIP-Seq(Jolma et al.)/Homer

Match Rank:8
Score:0.61
Offset:-2
Orientation:reverse strand
Alignment:--TGGAATGT
AATGGAAAAT

MA0101.1_REL/Jaspar

Match Rank:9
Score:0.60
Offset:1
Orientation:reverse strand
Alignment:TGGAATGT---
-GGAAANCCCC

PB0134.1_Hnf4a_2/Jaspar

Match Rank:10
Score:0.59
Offset:-4
Orientation:reverse strand
Alignment:----TGGAATGT----
NNATTGGACTTTNGNN