Information for motif30


Reverse Opposite:

p-value:1e-21
log p-value:-4.985e+01
Information Content per bp:1.676
Number of Target Sequences with motif30.0
Percentage of Target Sequences with motif0.49%
Number of Background Sequences with motif2.9
Percentage of Background Sequences with motif0.06%
Average Position of motif in Targets96.8 +/- 56.4bp
Average Position of motif in Background92.5 +/- 50.7bp
Strand Bias (log2 ratio + to - strand density)-0.1
Multiplicity (# of sites on avg that occur together)1.04
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

AR-halfsite(NR)/LNCaP-AR-ChIP-Seq(GSE27824)/Homer

Match Rank:1
Score:0.64
Offset:-1
Orientation:reverse strand
Alignment:-TGTCCGAGCG
CTGTTCCTGG-

PB0140.1_Irf6_2/Jaspar

Match Rank:2
Score:0.56
Offset:-1
Orientation:reverse strand
Alignment:-TGTCCGAGCG----
NNNACCGAGAGTNNN

POL010.1_DCE_S_III/Jaspar

Match Rank:3
Score:0.55
Offset:5
Orientation:forward strand
Alignment:TGTCCGAGCG
-----CAGCC

PB0133.1_Hic1_2/Jaspar

Match Rank:4
Score:0.55
Offset:-5
Orientation:forward strand
Alignment:-----TGTCCGAGCG-
GGGTGTGCCCAAAAGG

Nrf2(bZIP)/Lymphoblast-Nrf2-ChIP-Seq(GSE37589)/Homer

Match Rank:5
Score:0.54
Offset:-1
Orientation:reverse strand
Alignment:-TGTCCGAGCG-
ATGACTCAGCAD

PB0153.1_Nr2f2_2/Jaspar

Match Rank:6
Score:0.54
Offset:-4
Orientation:reverse strand
Alignment:----TGTCCGAGCG--
NNNNTGACCCGGCGCG

p53(p53)/mES-cMyc-ChIP-Seq(GSE11431)/Homer

Match Rank:7
Score:0.54
Offset:-1
Orientation:reverse strand
Alignment:-TGTCCGAGCG---
ATGCCCGGGCATGT

PB0086.1_Tcfap2b_1/Jaspar

Match Rank:8
Score:0.54
Offset:-1
Orientation:reverse strand
Alignment:-TGTCCGAGCG---
NTGCCCTAGGGCAA

MA0591.1_Bach1::Mafk/Jaspar

Match Rank:9
Score:0.54
Offset:-4
Orientation:forward strand
Alignment:----TGTCCGAGCG-
AGGATGACTCAGCAC

PB0138.1_Irf4_2/Jaspar

Match Rank:10
Score:0.53
Offset:-1
Orientation:reverse strand
Alignment:-TGTCCGAGCG----
GNNACCGAGAATNNN