Information for motif36


Reverse Opposite:

p-value:1e-13
log p-value:-3.087e+01
Information Content per bp:1.530
Number of Target Sequences with motif22.0
Percentage of Target Sequences with motif0.36%
Number of Background Sequences with motif2.9
Percentage of Background Sequences with motif0.06%
Average Position of motif in Targets90.4 +/- 50.4bp
Average Position of motif in Background49.2 +/- 45.4bp
Strand Bias (log2 ratio + to - strand density)1.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

PH0158.1_Rhox11_2/Jaspar

Match Rank:1
Score:0.74
Offset:-5
Orientation:reverse strand
Alignment:-----CTACAGCG----
TCNCTTTACAGCGNNNT

PH0157.1_Rhox11_1/Jaspar

Match Rank:2
Score:0.73
Offset:-5
Orientation:reverse strand
Alignment:-----CTACAGCG----
TCNNTTTACAGCGNNNT

POL009.1_DCE_S_II/Jaspar

Match Rank:3
Score:0.68
Offset:1
Orientation:reverse strand
Alignment:CTACAGCG
-CACAGN-

POL010.1_DCE_S_III/Jaspar

Match Rank:4
Score:0.65
Offset:3
Orientation:forward strand
Alignment:CTACAGCG
---CAGCC

RUNX-AML(Runt)/CD4+-PolII-ChIP-Seq(Barski et al.)/Homer

Match Rank:5
Score:0.60
Offset:-3
Orientation:reverse strand
Alignment:---CTACAGCG
AAACCACAGC-

MA0117.1_Mafb/Jaspar

Match Rank:6
Score:0.59
Offset:-1
Orientation:reverse strand
Alignment:-CTACAGCG
NCGTCAGC-

MA0032.1_FOXC1/Jaspar

Match Rank:7
Score:0.59
Offset:1
Orientation:reverse strand
Alignment:CTACAGCG-
-TACTNNNN

PB0091.1_Zbtb3_1/Jaspar

Match Rank:8
Score:0.58
Offset:-4
Orientation:reverse strand
Alignment:----CTACAGCG-----
NNNANTGCAGTGCNNTT

PB0050.1_Osr1_1/Jaspar

Match Rank:9
Score:0.56
Offset:-5
Orientation:reverse strand
Alignment:-----CTACAGCG---
TNNTGCTACTGTNNNN

PB0051.1_Osr2_1/Jaspar

Match Rank:10
Score:0.56
Offset:-5
Orientation:reverse strand
Alignment:-----CTACAGCG---
CNNNGCTACTGTANNN