Information for motif6


Reverse Opposite:

p-value:1e-58
log p-value:-1.354e+02
Information Content per bp:1.814
Number of Target Sequences with motif49.0
Percentage of Target Sequences with motif0.80%
Number of Background Sequences with motif2.0
Percentage of Background Sequences with motif0.04%
Average Position of motif in Targets103.2 +/- 47.6bp
Average Position of motif in Background113.1 +/- 40.1bp
Strand Bias (log2 ratio + to - strand density)-0.1
Multiplicity (# of sites on avg that occur together)1.04
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

POL013.1_MED-1/Jaspar

Match Rank:1
Score:0.71
Offset:4
Orientation:reverse strand
Alignment:AGCAGGGAGCTC
----CGGAGC--

Znf263(Zf)/K562-Znf263-ChIP-Seq(GSE31477)/Homer

Match Rank:2
Score:0.71
Offset:4
Orientation:reverse strand
Alignment:AGCAGGGAGCTC--
----GGGAGGACNG

Unknown-ESC-element/mES-Nanog-ChIP-Seq(GSE11724)/Homer

Match Rank:3
Score:0.69
Offset:-3
Orientation:forward strand
Alignment:---AGCAGGGAGCTC
CACAGCAGGGGG---

PB0155.1_Osr2_2/Jaspar

Match Rank:4
Score:0.64
Offset:-2
Orientation:reverse strand
Alignment:--AGCAGGGAGCTC--
NNTGTAGGTAGCANNT

PB0154.1_Osr1_2/Jaspar

Match Rank:5
Score:0.63
Offset:-2
Orientation:reverse strand
Alignment:--AGCAGGGAGCTC--
NNNTTAGGTAGCNTNT

MA0474.1_Erg/Jaspar

Match Rank:6
Score:0.59
Offset:1
Orientation:forward strand
Alignment:AGCAGGGAGCTC
-ACAGGAAGTGG

MA0475.1_FLI1/Jaspar

Match Rank:7
Score:0.59
Offset:1
Orientation:forward strand
Alignment:AGCAGGGAGCTC
-ACAGGAAGTGG

ERG(ETS)/VCaP-ERG-ChIP-Seq(GSE14097)/Homer

Match Rank:8
Score:0.58
Offset:1
Orientation:forward strand
Alignment:AGCAGGGAGCTC
-ACAGGAAGTG-

PB0099.1_Zfp691_1/Jaspar

Match Rank:9
Score:0.58
Offset:1
Orientation:reverse strand
Alignment:AGCAGGGAGCTC------
-NNNNTGAGCACTGTNNG

BORIS(Zf)/K562-CTCFL-ChIP-Seq(GSE32465)/Homer

Match Rank:10
Score:0.58
Offset:-3
Orientation:reverse strand
Alignment:---AGCAGGGAGCTC-----
GCCASCAGGGGGCGCYVNNG