Information for motif7


Reverse Opposite:

p-value:1e-58
log p-value:-1.354e+02
Information Content per bp:1.913
Number of Target Sequences with motif49.0
Percentage of Target Sequences with motif0.80%
Number of Background Sequences with motif0.0
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets99.3 +/- 55.1bp
Average Position of motif in Background0.0 +/- 0.0bp
Strand Bias (log2 ratio + to - strand density)0.2
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0009.1_E2F3_1/Jaspar

Match Rank:1
Score:0.83
Offset:-3
Orientation:reverse strand
Alignment:---GCGCGCCA----
ANCGCGCGCCCTTNN

PB0008.1_E2F2_1/Jaspar

Match Rank:2
Score:0.83
Offset:-6
Orientation:forward strand
Alignment:------GCGCGCCA-
ATAAAGGCGCGCGAT

POL006.1_BREu/Jaspar

Match Rank:3
Score:0.80
Offset:-1
Orientation:forward strand
Alignment:-GCGCGCCA
AGCGCGCC-

PB0095.1_Zfp161_1/Jaspar

Match Rank:4
Score:0.71
Offset:-8
Orientation:reverse strand
Alignment:--------GCGCGCCA
NCANGCGCGCGCGCCA

PB0199.1_Zfp161_2/Jaspar

Match Rank:5
Score:0.69
Offset:-7
Orientation:reverse strand
Alignment:-------GCGCGCCA
NNGCNCTGCGCGGC-

PB0164.1_Smad3_2/Jaspar

Match Rank:6
Score:0.67
Offset:-4
Orientation:forward strand
Alignment:----GCGCGCCA-----
TACGCCCCGCCACTCTG

MA0024.2_E2F1/Jaspar

Match Rank:7
Score:0.66
Offset:-1
Orientation:forward strand
Alignment:-GCGCGCCA--
CGGGCGGGAGG

Arnt:Ahr(bHLH)/MCF7-Arnt-ChIP-Seq(Lo et al.)/Homer

Match Rank:8
Score:0.64
Offset:-2
Orientation:forward strand
Alignment:--GCGCGCCA
TBGCACGCAA

PB0113.1_E2F3_2/Jaspar

Match Rank:9
Score:0.62
Offset:-4
Orientation:forward strand
Alignment:----GCGCGCCA-----
AGCTCGGCGCCAAAAGC

PB0112.1_E2F2_2/Jaspar

Match Rank:10
Score:0.61
Offset:-4
Orientation:forward strand
Alignment:----GCGCGCCA-----
CCTTCGGCGCCAAAAGG