Information for motif9


Reverse Opposite:

p-value:1e-48
log p-value:-1.117e+02
Information Content per bp:1.659
Number of Target Sequences with motif52.0
Percentage of Target Sequences with motif0.85%
Number of Background Sequences with motif2.7
Percentage of Background Sequences with motif0.05%
Average Position of motif in Targets105.0 +/- 55.0bp
Average Position of motif in Background127.1 +/- 49.1bp
Strand Bias (log2 ratio + to - strand density)-0.2
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0091.1_Zbtb3_1/Jaspar

Match Rank:1
Score:0.60
Offset:-4
Orientation:reverse strand
Alignment:----AAGCGGTGCG---
NNNANTGCAGTGCNNTT

POL013.1_MED-1/Jaspar

Match Rank:2
Score:0.59
Offset:3
Orientation:reverse strand
Alignment:AAGCGGTGCG
---CGGAGC-

PB0199.1_Zfp161_2/Jaspar

Match Rank:3
Score:0.58
Offset:0
Orientation:reverse strand
Alignment:AAGCGGTGCG----
NNGCNCTGCGCGGC

Sp1(Zf)/Promoter/Homer

Match Rank:4
Score:0.56
Offset:-2
Orientation:reverse strand
Alignment:--AAGCGGTGCG
GGGGGCGGGGCC

Gfi1b(Zf)/HPC7-Gfi1b-ChIP-Seq(GSE22178)/Homer

Match Rank:5
Score:0.54
Offset:-1
Orientation:forward strand
Alignment:-AAGCGGTGCG
AAATCACTGC-

POL010.1_DCE_S_III/Jaspar

Match Rank:6
Score:0.54
Offset:0
Orientation:forward strand
Alignment:AAGCGGTGCG
CAGCC-----

PB0076.1_Sp4_1/Jaspar

Match Rank:7
Score:0.53
Offset:-2
Orientation:reverse strand
Alignment:--AAGCGGTGCG-----
NNNAAGGGGGCGGGNNN

MA0516.1_SP2/Jaspar

Match Rank:8
Score:0.52
Offset:-6
Orientation:reverse strand
Alignment:------AAGCGGTGCG
GGGNGGGGGCGGGGC-

POL003.1_GC-box/Jaspar

Match Rank:9
Score:0.52
Offset:-3
Orientation:forward strand
Alignment:---AAGCGGTGCG-
AGGGGGCGGGGCTG

PB0089.1_Tcfe2a_1/Jaspar

Match Rank:10
Score:0.51
Offset:-3
Orientation:forward strand
Alignment:---AAGCGGTGCG----
ATCCACAGGTGCGAAAA