Information for motif12


Reverse Opposite:

p-value:1e-16
log p-value:-3.906e+01
Information Content per bp:1.646
Number of Target Sequences with motif235.0
Percentage of Target Sequences with motif3.84%
Number of Background Sequences with motif917.0
Percentage of Background Sequences with motif2.10%
Average Position of motif in Targets95.4 +/- 52.8bp
Average Position of motif in Background99.9 +/- 56.4bp
Strand Bias (log2 ratio + to - strand density)-0.4
Multiplicity (# of sites on avg that occur together)1.01
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0038.1_Jundm2_1/Jaspar

Match Rank:1
Score:0.82
Offset:-2
Orientation:reverse strand
Alignment:--GATTACGTCA----
NCGATGACGTCATCGN

Atf1(bZIP)/K562-ATF1-ChIP-Seq(GSE31477)/Homer

Match Rank:2
Score:0.81
Offset:0
Orientation:forward strand
Alignment:GATTACGTCA
GATGACGTCA

JunD(bZIP)/K562-JunD-ChIP-Seq/Homer

Match Rank:3
Score:0.80
Offset:-1
Orientation:reverse strand
Alignment:-GATTACGTCA-
NGATGACGTCAT

c-Jun-CRE(bZIP)/K562-cJun-ChIP-Seq(GSE31477)/Homer

Match Rank:4
Score:0.79
Offset:-1
Orientation:reverse strand
Alignment:-GATTACGTCA-
NGATGACGTCAT

PB0004.1_Atf1_1/Jaspar

Match Rank:5
Score:0.79
Offset:-2
Orientation:reverse strand
Alignment:--GATTACGTCA----
NCGATGACGTCATCGN

MA0492.1_JUND_(var.2)/Jaspar

Match Rank:6
Score:0.77
Offset:0
Orientation:reverse strand
Alignment:GATTACGTCA-----
NATGACATCATCNNN

MA0018.2_CREB1/Jaspar

Match Rank:7
Score:0.77
Offset:2
Orientation:reverse strand
Alignment:GATTACGTCA
--TGACGTCA

MF0002.1_bZIP_CREB/G-box-like_subclass/Jaspar

Match Rank:8
Score:0.75
Offset:4
Orientation:reverse strand
Alignment:GATTACGTCA
----ACGTCA

MA0488.1_JUN/Jaspar

Match Rank:9
Score:0.75
Offset:1
Orientation:reverse strand
Alignment:GATTACGTCA----
-ATGACATCATCNN

MF0006.1_bZIP_cEBP-like_subclass/Jaspar

Match Rank:10
Score:0.71
Offset:1
Orientation:forward strand
Alignment:GATTACGTCA
-ATTGCATAA