Information for motif16


Reverse Opposite:

p-value:1e-11
log p-value:-2.561e+01
Information Content per bp:1.870
Number of Target Sequences with motif28.0
Percentage of Target Sequences with motif0.46%
Number of Background Sequences with motif39.6
Percentage of Background Sequences with motif0.09%
Average Position of motif in Targets107.1 +/- 52.0bp
Average Position of motif in Background105.0 +/- 51.3bp
Strand Bias (log2 ratio + to - strand density)-0.2
Multiplicity (# of sites on avg that occur together)1.07
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

REST-NRSF(Zf)/Jurkat-NRSF-ChIP-Seq/Homer

Match Rank:1
Score:0.81
Offset:-7
Orientation:forward strand
Alignment:-------TCCATGGTGCTG-
GGAGCTGTCCATGGTGCTGA

MA0138.2_REST/Jaspar

Match Rank:2
Score:0.80
Offset:-7
Orientation:reverse strand
Alignment:-------TCCATGGTGCTG--
GGCGCTGTCCATGGTGCTGAA

Sox2(HMG)/mES-Sox2-ChIP-Seq(GSE11431)/Homer

Match Rank:3
Score:0.57
Offset:0
Orientation:forward strand
Alignment:TCCATGGTGCTG
NCCATTGTTC--

MA0143.3_Sox2/Jaspar

Match Rank:4
Score:0.56
Offset:1
Orientation:forward strand
Alignment:TCCATGGTGCTG
-CCTTTGTT---

MA0515.1_Sox6/Jaspar

Match Rank:5
Score:0.56
Offset:1
Orientation:forward strand
Alignment:TCCATGGTGCTG
-CCATTGTTTT-

MA0077.1_SOX9/Jaspar

Match Rank:6
Score:0.54
Offset:1
Orientation:forward strand
Alignment:TCCATGGTGCTG
-CCATTGTTC--

MA0496.1_MAFK/Jaspar

Match Rank:7
Score:0.53
Offset:3
Orientation:reverse strand
Alignment:TCCATGGTGCTG------
---AAANTGCTGACTNAG

MafA(bZIP)/Islet-MafA-ChIP-Seq(GSE30298)/Homer

Match Rank:8
Score:0.52
Offset:7
Orientation:forward strand
Alignment:TCCATGGTGCTG-----
-------TGCTGACTCA

PB0061.1_Sox11_1/Jaspar

Match Rank:9
Score:0.52
Offset:-3
Orientation:reverse strand
Alignment:---TCCATGGTGCTG--
NNNTCCTTTGTTCTNNN

MA0154.2_EBF1/Jaspar

Match Rank:10
Score:0.51
Offset:0
Orientation:reverse strand
Alignment:TCCATGGTGCTG
TCCCTGGGGAN-