| p-value: | 1e-10 |
| log p-value: | -2.438e+01 |
| Information Content per bp: | 1.883 |
| Number of Target Sequences with motif | 11.0 |
| Percentage of Target Sequences with motif | 0.18% |
| Number of Background Sequences with motif | 4.1 |
| Percentage of Background Sequences with motif | 0.01% |
| Average Position of motif in Targets | 95.9 +/- 45.1bp |
| Average Position of motif in Background | 50.1 +/- 39.1bp |
| Strand Bias (log2 ratio + to - strand density) | -0.4 |
| Multiplicity (# of sites on avg that occur together) | 1.27 |
| Motif File: | file (matrix)
reverse opposite |
| PDF Format Logos: | forward logo
reverse opposite |
Rfx5(HTH)/GM12878-Rfx5-ChIP-Seq(GSE31477)/Homer
| Match Rank: | 1 |
| Score: | 0.68
| | Offset: | 1
| | Orientation: | forward strand |
| Alignment: | AACATAGTAACT-
-SCCTAGCAACAG |
|
|
|
PB0055.1_Rfx4_1/Jaspar
| Match Rank: | 2 |
| Score: | 0.64
| | Offset: | -1
| | Orientation: | forward strand |
| Alignment: | -AACATAGTAACT--
TACCATAGCAACGGT |
|
|
|
PB0056.1_Rfxdc2_1/Jaspar
| Match Rank: | 3 |
| Score: | 0.63
| | Offset: | -1
| | Orientation: | forward strand |
| Alignment: | -AACATAGTAACT--
CCGCATAGCAACGGA |
|
|
|
MA0510.1_RFX5/Jaspar
| Match Rank: | 4 |
| Score: | 0.59
| | Offset: | -1
| | Orientation: | forward strand |
| Alignment: | -AACATAGTAACT--
CTCCCTGGCAACAGC |
|
|
|
PB0054.1_Rfx3_1/Jaspar
| Match Rank: | 5 |
| Score: | 0.59
| | Offset: | -5
| | Orientation: | forward strand |
| Alignment: | -----AACATAGTAACT------
TGTGACCCTTAGCAACCGATTAA |
|
|
|
PB0115.1_Ehf_2/Jaspar
| Match Rank: | 6 |
| Score: | 0.59
| | Offset: | 0
| | Orientation: | reverse strand |
| Alignment: | AACATAGTAACT----
AAGATCGGAANTNNNA |
|
|
|
MA0509.1_Rfx1/Jaspar
| Match Rank: | 7 |
| Score: | 0.59
| | Offset: | -3
| | Orientation: | forward strand |
| Alignment: | ---AACATAGTAACT
GTTGCCATGGCAAC- |
|
|
|
PB0159.1_Rfx4_2/Jaspar
| Match Rank: | 8 |
| Score: | 0.58
| | Offset: | -1
| | Orientation: | forward strand |
| Alignment: | -AACATAGTAACT--
TACCCTAGTTACCGA |
|
|
|
X-box(HTH)/NPC-H3K4me1-ChIP-Seq(GSE16256)/Homer
| Match Rank: | 9 |
| Score: | 0.56
| | Offset: | -2
| | Orientation: | reverse strand |
| Alignment: | --AACATAGTAACT
TTGCCATGGCAACC |
|
|
|
MA0600.1_RFX2/Jaspar
| Match Rank: | 10 |
| Score: | 0.55
| | Offset: | -3
| | Orientation: | forward strand |
| Alignment: | ---AACATAGTAACT----
GTTGCCATGGCAACCGCGG |
|
|
|
