Information for motif20


Reverse Opposite:

p-value:1e-7
log p-value:-1.767e+01
Information Content per bp:1.530
Number of Target Sequences with motif7.0
Percentage of Target Sequences with motif0.11%
Number of Background Sequences with motif2.9
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets124.3 +/- 36.8bp
Average Position of motif in Background66.7 +/- 31.3bp
Strand Bias (log2 ratio + to - strand density)1.3
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

CEBP(bZIP)/CEBPb-ChIP-Seq(GSE21512)/Homer

Match Rank:1
Score:0.75
Offset:1
Orientation:reverse strand
Alignment:CGTTGTACAATT
-GTTGCGCAAT-

PB0173.1_Sox21_2/Jaspar

Match Rank:2
Score:0.64
Offset:-1
Orientation:reverse strand
Alignment:-CGTTGTACAATT----
NNNNNGAACAATTGANN

MA0102.3_CEBPA/Jaspar

Match Rank:3
Score:0.64
Offset:0
Orientation:reverse strand
Alignment:CGTTGTACAATT
NATTGTGCAAT-

MA0466.1_CEBPB/Jaspar

Match Rank:4
Score:0.63
Offset:1
Orientation:reverse strand
Alignment:CGTTGTACAATT
-ATTGTGCAATA

PB0175.1_Sox4_2/Jaspar

Match Rank:5
Score:0.61
Offset:0
Orientation:reverse strand
Alignment:CGTTGTACAATT-----
TNCNNAACAATTTTTNC

PB0070.1_Sox30_1/Jaspar

Match Rank:6
Score:0.61
Offset:1
Orientation:forward strand
Alignment:CGTTGTACAATT-----
-AATGAACAATGGAATT

PB0065.1_Sox15_1/Jaspar

Match Rank:7
Score:0.60
Offset:0
Orientation:forward strand
Alignment:CGTTGTACAATT-----
TAGTGAACAATAGATTT

PB0165.1_Sox11_2/Jaspar

Match Rank:8
Score:0.59
Offset:0
Orientation:reverse strand
Alignment:CGTTGTACAATT--
NNCNNAACAATTNT

MA0442.1_SOX10/Jaspar

Match Rank:9
Score:0.59
Offset:0
Orientation:forward strand
Alignment:CGTTGTACAATT
CTTTGT------

PB0183.1_Sry_2/Jaspar

Match Rank:10
Score:0.59
Offset:-1
Orientation:forward strand
Alignment:-CGTTGTACAATT----
TCACGGAACAATAGGTG