Information for motif21


Reverse Opposite:

p-value:1e-6
log p-value:-1.445e+01
Information Content per bp:1.530
Number of Target Sequences with motif6.0
Percentage of Target Sequences with motif0.10%
Number of Background Sequences with motif2.5
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets97.0 +/- 44.2bp
Average Position of motif in Background96.3 +/- 75.0bp
Strand Bias (log2 ratio + to - strand density)0.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0150.1_Mybl1_2/Jaspar

Match Rank:1
Score:0.72
Offset:-2
Orientation:reverse strand
Alignment:--CTGCGGTTGG---
CACGGCAGTTGGTNN

RUNX(Runt)/HPC7-Runx1-ChIP-Seq(GSE22178)/Homer

Match Rank:2
Score:0.71
Offset:0
Orientation:reverse strand
Alignment:CTGCGGTTGG
CTGTGGTTTN

RUNX1(Runt)/Jurkat-RUNX1-ChIP-Seq(GSE29180)/Homer

Match Rank:3
Score:0.67
Offset:-1
Orientation:reverse strand
Alignment:-CTGCGGTTGG
NNTGTGGTTT-

MA0002.2_RUNX1/Jaspar

Match Rank:4
Score:0.67
Offset:-2
Orientation:forward strand
Alignment:--CTGCGGTTGG
GTCTGTGGTTT-

RUNX-AML(Runt)/CD4+-PolII-ChIP-Seq(Barski et al.)/Homer

Match Rank:5
Score:0.67
Offset:-1
Orientation:forward strand
Alignment:-CTGCGGTTGG
GCTGTGGTTT-

MYB(HTH)/ERMYB-Myb-ChIPSeq(GSE22095)/Homer

Match Rank:6
Score:0.64
Offset:1
Orientation:forward strand
Alignment:CTGCGGTTGG
-GGCVGTTR-

PB0149.1_Myb_2/Jaspar

Match Rank:7
Score:0.64
Offset:-3
Orientation:reverse strand
Alignment:---CTGCGGTTGG---
NNNTGGCAGTTGGTNN

RUNX2(Runt)/PCa-RUNX2-ChIP-Seq(GSE33889)/Homer

Match Rank:8
Score:0.63
Offset:-2
Orientation:reverse strand
Alignment:--CTGCGGTTGG
NNHTGTGGTTWN

AMYB(HTH)/Testes-AMYB-ChIP-Seq(GSE44588)/Homer

Match Rank:9
Score:0.63
Offset:0
Orientation:forward strand
Alignment:CTGCGGTTGG
TGGCAGTTGG

BMYB(HTH)/Hela-BMYB-ChIPSeq(GSE27030)/Homer

Match Rank:10
Score:0.63
Offset:0
Orientation:reverse strand
Alignment:CTGCGGTTGG
BRRCVGTTDN