Information for motif22


Reverse Opposite:

p-value:1e-5
log p-value:-1.336e+01
Information Content per bp:1.749
Number of Target Sequences with motif26.0
Percentage of Target Sequences with motif0.42%
Number of Background Sequences with motif62.6
Percentage of Background Sequences with motif0.14%
Average Position of motif in Targets121.1 +/- 56.9bp
Average Position of motif in Background104.1 +/- 57.8bp
Strand Bias (log2 ratio + to - strand density)0.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

FOXA1(Forkhead)/MCF7-FOXA1-ChIP-Seq(GSE26831)/Homer

Match Rank:1
Score:0.65
Offset:1
Orientation:reverse strand
Alignment:CGATTTACTT-
-TGTTTACTTT

FOXA1(Forkhead)/LNCAP-FOXA1-ChIP-Seq(GSE27824)/Homer

Match Rank:2
Score:0.64
Offset:1
Orientation:reverse strand
Alignment:CGATTTACTT-
-TGTTTACTTT

MA0124.1_NKX3-1/Jaspar

Match Rank:3
Score:0.62
Offset:4
Orientation:forward strand
Alignment:CGATTTACTT-
----ATACTTA

MA0047.2_Foxa2/Jaspar

Match Rank:4
Score:0.60
Offset:1
Orientation:forward strand
Alignment:CGATTTACTT---
-TGTTTACTTAGG

MA0148.3_FOXA1/Jaspar

Match Rank:5
Score:0.59
Offset:-3
Orientation:forward strand
Alignment:---CGATTTACTT--
TCCATGTTTACTTTG

MA0122.1_Nkx3-2/Jaspar

Match Rank:6
Score:0.59
Offset:3
Orientation:reverse strand
Alignment:CGATTTACTT--
---NCCACTTAN

Foxa2(Forkhead)/Liver-Foxa2-ChIP-Seq(GSE25694)/Homer

Match Rank:7
Score:0.58
Offset:-1
Orientation:forward strand
Alignment:-CGATTTACTT-
CNTGTTTACATA

MA0032.1_FOXC1/Jaspar

Match Rank:8
Score:0.58
Offset:5
Orientation:reverse strand
Alignment:CGATTTACTT---
-----TACTNNNN

PB0015.1_Foxa2_1/Jaspar

Match Rank:9
Score:0.56
Offset:-4
Orientation:reverse strand
Alignment:----CGATTTACTT---
NNNTTTGTTTACTTTTN

MF0005.1_Forkhead_class/Jaspar

Match Rank:10
Score:0.56
Offset:1
Orientation:forward strand
Alignment:CGATTTACTT
-TGTTTATTT