| p-value: | 1e-4 |
| log p-value: | -1.018e+01 |
| Information Content per bp: | 1.732 |
| Number of Target Sequences with motif | 12.0 |
| Percentage of Target Sequences with motif | 0.20% |
| Number of Background Sequences with motif | 20.6 |
| Percentage of Background Sequences with motif | 0.05% |
| Average Position of motif in Targets | 70.7 +/- 52.9bp |
| Average Position of motif in Background | 90.4 +/- 50.9bp |
| Strand Bias (log2 ratio + to - strand density) | 1.7 |
| Multiplicity (# of sites on avg that occur together) | 1.42 |
| Motif File: | file (matrix)
reverse opposite |
| PDF Format Logos: | forward logo
reverse opposite |
Smad3(MAD)/NPC-Smad3-ChIP-Seq(GSE36673)/Homer
| Match Rank: | 1 |
| Score: | 0.64
| | Offset: | 2
| | Orientation: | reverse strand |
| Alignment: | RTCTAGCCAGSG
--BCAGACWA-- |
|
|
|
PB0060.1_Smad3_1/Jaspar
| Match Rank: | 2 |
| Score: | 0.64
| | Offset: | -3
| | Orientation: | forward strand |
| Alignment: | ---RTCTAGCCAGSG--
CAAATCCAGACATCACA |
|
|
|
Smad2(MAD)/ES-SMAD2-ChIP-Seq(GSE29422)/Homer
| Match Rank: | 3 |
| Score: | 0.63
| | Offset: | 2
| | Orientation: | reverse strand |
| Alignment: | RTCTAGCCAGSG
--CCAGACAG-- |
|
|
|
MA0161.1_NFIC/Jaspar
| Match Rank: | 4 |
| Score: | 0.63
| | Offset: | 4
| | Orientation: | reverse strand |
| Alignment: | RTCTAGCCAGSG
----TGCCAA-- |
|
|
|
GLI3(Zf)/GLI3-ChIP-Chip(GSE11077)/Homer
| Match Rank: | 5 |
| Score: | 0.61
| | Offset: | -1
| | Orientation: | reverse strand |
| Alignment: | -RTCTAGCCAGSG
GGACCACCCACG- |
|
|
|
NF1-halfsite(CTF)/LNCaP-NF1-ChIP-Seq(Unpublished)/Homer
| Match Rank: | 6 |
| Score: | 0.59
| | Offset: | 2
| | Orientation: | reverse strand |
| Alignment: | RTCTAGCCAGSG
--CTTGGCAA-- |
|
|
|
POL009.1_DCE_S_II/Jaspar
| Match Rank: | 7 |
| Score: | 0.58
| | Offset: | 5
| | Orientation: | reverse strand |
| Alignment: | RTCTAGCCAGSG
-----CACAGN- |
|
|
|
Smad4(MAD)/ESC-SMAD4-ChIP-Seq(GSE29422)/Homer
| Match Rank: | 8 |
| Score: | 0.57
| | Offset: | 2
| | Orientation: | reverse strand |
| Alignment: | RTCTAGCCAGSG
--CCAGACRSVB |
|
|
|
POL004.1_CCAAT-box/Jaspar
| Match Rank: | 9 |
| Score: | 0.57
| | Offset: | 1
| | Orientation: | forward strand |
| Alignment: | RTCTAGCCAGSG-
-ACTAGCCAATCA |
|
|
|
Tlx?(NR)/NPC-H3K4me1-ChIP-Seq(GSE16256)/Homer
| Match Rank: | 10 |
| Score: | 0.56
| | Offset: | -4
| | Orientation: | reverse strand |
| Alignment: | ----RTCTAGCCAGSG
TGGCAGNCTGCCAG-- |
|
|
|
