Information for motif25


Reverse Opposite:

p-value:1e-4
log p-value:-9.434e+00
Information Content per bp:1.944
Number of Target Sequences with motif18.0
Percentage of Target Sequences with motif0.29%
Number of Background Sequences with motif44.4
Percentage of Background Sequences with motif0.10%
Average Position of motif in Targets95.6 +/- 54.4bp
Average Position of motif in Background97.5 +/- 52.6bp
Strand Bias (log2 ratio + to - strand density)-0.1
Multiplicity (# of sites on avg that occur together)1.50
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

EWS:ERG-fusion(ETS)/CADO_ES1-EWS:ERG-ChIP-Seq(SRA014231)/Homer

Match Rank:1
Score:0.70
Offset:1
Orientation:forward strand
Alignment:GATTTTCTGA-
-ATTTCCTGTN

EWS:FLI1-fusion(ETS)/SK_N_MC-EWS:FLI1-ChIP-Seq(SRA014231)/Homer

Match Rank:2
Score:0.65
Offset:1
Orientation:reverse strand
Alignment:GATTTTCTGA-
-ATTTCCTGTN

MA0156.1_FEV/Jaspar

Match Rank:3
Score:0.65
Offset:1
Orientation:reverse strand
Alignment:GATTTTCTGA
-ATTTCCTG-

MA0038.1_Gfi1/Jaspar

Match Rank:4
Score:0.62
Offset:-4
Orientation:reverse strand
Alignment:----GATTTTCTGA
CNGTGATTTN----

PB0041.1_Mafb_1/Jaspar

Match Rank:5
Score:0.61
Offset:-1
Orientation:forward strand
Alignment:-GATTTTCTGA------
AAATTTGCTGACTTAGA

Cdx2(Homeobox)/mES-Cdx2-ChIP-Seq(GSE14586)/Homer

Match Rank:6
Score:0.60
Offset:1
Orientation:reverse strand
Alignment:GATTTTCTGA-
-NTTTTATGAC

PH0068.1_Hoxc13/Jaspar

Match Rank:7
Score:0.60
Offset:-1
Orientation:reverse strand
Alignment:-GATTTTCTGA-----
NAATTTTACGAGNTNN

PB0168.1_Sox14_2/Jaspar

Match Rank:8
Score:0.59
Offset:-4
Orientation:reverse strand
Alignment:----GATTTTCTGA-
NNNCCATTGTGTNAN

MA0496.1_MAFK/Jaspar

Match Rank:9
Score:0.59
Offset:0
Orientation:reverse strand
Alignment:GATTTTCTGA-----
AAANTGCTGACTNAG

Smad3(MAD)/NPC-Smad3-ChIP-Seq(GSE36673)/Homer

Match Rank:10
Score:0.58
Offset:2
Orientation:forward strand
Alignment:GATTTTCTGA
--TWGTCTGV