Information for motif7


Reverse Opposite:

p-value:1e-29
log p-value:-6.864e+01
Information Content per bp:1.688
Number of Target Sequences with motif262.0
Percentage of Target Sequences with motif4.28%
Number of Background Sequences with motif848.2
Percentage of Background Sequences with motif1.94%
Average Position of motif in Targets103.4 +/- 54.6bp
Average Position of motif in Background93.7 +/- 57.0bp
Strand Bias (log2 ratio + to - strand density)0.1
Multiplicity (# of sites on avg that occur together)1.05
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

MA0079.3_SP1/Jaspar

Match Rank:1
Score:0.85
Offset:0
Orientation:forward strand
Alignment:GCTCCTCCCCCC
GCCCCGCCCCC-

POL003.1_GC-box/Jaspar

Match Rank:2
Score:0.83
Offset:-2
Orientation:reverse strand
Alignment:--GCTCCTCCCCCC
NAGCCCCGCCCCCN

MA0599.1_KLF5/Jaspar

Match Rank:3
Score:0.83
Offset:0
Orientation:forward strand
Alignment:GCTCCTCCCCCC
GCCCCGCCCC--

Sp1(Zf)/Promoter/Homer

Match Rank:4
Score:0.77
Offset:-1
Orientation:forward strand
Alignment:-GCTCCTCCCCCC
GGCCCCGCCCCC-

MA0516.1_SP2/Jaspar

Match Rank:5
Score:0.76
Offset:0
Orientation:forward strand
Alignment:GCTCCTCCCCCC---
GCCCCGCCCCCTCCC

MA0039.2_Klf4/Jaspar

Match Rank:6
Score:0.76
Offset:0
Orientation:reverse strand
Alignment:GCTCCTCCCCCC
GCCCCACCCA--

Maz(Zf)/HepG2-Maz-ChIP-Seq(GSE31477)/Homer

Match Rank:7
Score:0.75
Offset:1
Orientation:reverse strand
Alignment:GCTCCTCCCCCC
-CCCCCCCC---

KLF5(Zf)/LoVo-KLF5-ChIP-Seq(GSE49402)/Homer

Match Rank:8
Score:0.72
Offset:0
Orientation:reverse strand
Alignment:GCTCCTCCCCCC
GCCMCRCCCH--

PB0039.1_Klf7_1/Jaspar

Match Rank:9
Score:0.71
Offset:-3
Orientation:forward strand
Alignment:---GCTCCTCCCCCC-
TCGACCCCGCCCCTAT

PB0097.1_Zfp281_1/Jaspar

Match Rank:10
Score:0.71
Offset:-3
Orientation:forward strand
Alignment:---GCTCCTCCCCCC
TCCCCCCCCCCCCCC