| p-value: | 1e-24 |
| log p-value: | -5.562e+01 |
| Information Content per bp: | 1.667 |
| Number of Target Sequences with motif | 273.0 |
| Percentage of Target Sequences with motif | 4.46% |
| Number of Background Sequences with motif | 985.5 |
| Percentage of Background Sequences with motif | 2.26% |
| Average Position of motif in Targets | 99.2 +/- 52.9bp |
| Average Position of motif in Background | 99.7 +/- 56.4bp |
| Strand Bias (log2 ratio + to - strand density) | 0.0 |
| Multiplicity (# of sites on avg that occur together) | 1.04 |
| Motif File: | file (matrix)
reverse opposite |
| PDF Format Logos: | forward logo
reverse opposite |
X-box(HTH)/NPC-H3K4me1-ChIP-Seq(GSE16256)/Homer
| Match Rank: | 1 |
| Score: | 0.89
| | Offset: | -1
| | Orientation: | forward strand |
| Alignment: | -GTTBCCATGGAA-
GGTTGCCATGGCAA |
|
|
|
Rfx1(HTH)/NPC-H3K4me1-ChIP-Seq(GSE16256)/Homer
| Match Rank: | 2 |
| Score: | 0.88
| | Offset: | -1
| | Orientation: | forward strand |
| Alignment: | -GTTBCCATGGAA-
NGTTGCCATGGCAA |
|
|
|
MA0509.1_Rfx1/Jaspar
| Match Rank: | 3 |
| Score: | 0.86
| | Offset: | 0
| | Orientation: | reverse strand |
| Alignment: | GTTBCCATGGAA--
GTTGCCATGGNAAC |
|
|
|
MA0600.1_RFX2/Jaspar
| Match Rank: | 4 |
| Score: | 0.85
| | Offset: | -5
| | Orientation: | reverse strand |
| Alignment: | -----GTTBCCATGGAA--
NNNCNGTTGCCATGGNAAC |
|
|
|
Rfx2(HTH)/LoVo-RFX2-ChIP-Seq(GSE49402)/Homer
| Match Rank: | 5 |
| Score: | 0.82
| | Offset: | 0
| | Orientation: | forward strand |
| Alignment: | GTTBCCATGGAA---
GTTGCCATGGCAACM |
|
|
|
RFX(HTH)/K562-RFX3-ChIP-Seq(SRA012198)/Homer
| Match Rank: | 6 |
| Score: | 0.81
| | Offset: | -2
| | Orientation: | forward strand |
| Alignment: | --GTTBCCATGGAA--
CGGTTGCCATGGCAAC |
|
|
|
MA0510.1_RFX5/Jaspar
| Match Rank: | 7 |
| Score: | 0.80
| | Offset: | -3
| | Orientation: | reverse strand |
| Alignment: | ---GTTBCCATGGAA
NCTGTTGCCAGGGAG |
|
|
|
Rfx5(HTH)/GM12878-Rfx5-ChIP-Seq(GSE31477)/Homer
| Match Rank: | 8 |
| Score: | 0.77
| | Offset: | -2
| | Orientation: | reverse strand |
| Alignment: | --GTTBCCATGGAA
CTGTTGCTAGGS-- |
|
|
|
PB0055.1_Rfx4_1/Jaspar
| Match Rank: | 9 |
| Score: | 0.76
| | Offset: | -3
| | Orientation: | reverse strand |
| Alignment: | ---GTTBCCATGGAA
NNCGTTGCTATGGNN |
|
|
|
PB0054.1_Rfx3_1/Jaspar
| Match Rank: | 10 |
| Score: | 0.71
| | Offset: | -7
| | Orientation: | reverse strand |
| Alignment: | -------GTTBCCATGGAA----
NTNNNNNGTTGCTANGGNNCANA |
|
|
|
