Information for motif10


Reverse Opposite:

p-value:1e-16
log p-value:-3.900e+01
Information Content per bp:1.732
Number of Target Sequences with motif846.0
Percentage of Target Sequences with motif14.68%
Number of Background Sequences with motif4837.8
Percentage of Background Sequences with motif11.02%
Average Position of motif in Targets103.7 +/- 55.5bp
Average Position of motif in Background99.0 +/- 58.8bp
Strand Bias (log2 ratio + to - strand density)0.0
Multiplicity (# of sites on avg that occur together)1.09
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

MA0502.1_NFYB/Jaspar

Match Rank:1
Score:0.69
Offset:-7
Orientation:forward strand
Alignment:-------TCTATCAG
AAATGGACCAATCAG

MA0060.2_NFYA/Jaspar

Match Rank:2
Score:0.69
Offset:-4
Orientation:reverse strand
Alignment:----TCTATCAG------
TGGACCAATCAGCACTCT

PB0188.1_Tcf7l2_2/Jaspar

Match Rank:3
Score:0.67
Offset:-5
Orientation:forward strand
Alignment:-----TCTATCAG---
GAAGATCAATCACTAA

MA0070.1_PBX1/Jaspar

Match Rank:4
Score:0.66
Offset:-3
Orientation:forward strand
Alignment:---TCTATCAG-
CCATCAATCAAA

PB0144.1_Lef1_2/Jaspar

Match Rank:5
Score:0.65
Offset:-5
Orientation:forward strand
Alignment:-----TCTATCAG---
GAAGATCAATCACTTA

Pdx1(Homeobox)/Islet-Pdx1-ChIP-Seq(SRA008281)/Homer

Match Rank:6
Score:0.64
Offset:-3
Orientation:forward strand
Alignment:---TCTATCAG
TCATCAATCA-

NeuroD1(bHLH)/Islet-NeuroD1-ChIP-Seq(GSE30298)/Homer

Match Rank:7
Score:0.64
Offset:0
Orientation:forward strand
Alignment:TCTATCAG--
GCCATCTGTT

NFY(CCAAT)/Promoter/Homer

Match Rank:8
Score:0.63
Offset:-2
Orientation:forward strand
Alignment:--TCTATCAG
AGCCAATCGG

HOXA2(Homeobox)/mES-Hoxa2-ChIP-Seq(Donaldson et al.)/Homer

Match Rank:9
Score:0.63
Offset:-4
Orientation:forward strand
Alignment:----TCTATCAG
GYCATCMATCAT

MA0461.1_Atoh1/Jaspar

Match Rank:10
Score:0.62
Offset:0
Orientation:reverse strand
Alignment:TCTATCAG
GCCATCTG