Information for motif12


Reverse Opposite:

p-value:1e-16
log p-value:-3.760e+01
Information Content per bp:1.694
Number of Target Sequences with motif122.0
Percentage of Target Sequences with motif2.12%
Number of Background Sequences with motif394.6
Percentage of Background Sequences with motif0.90%
Average Position of motif in Targets96.1 +/- 52.8bp
Average Position of motif in Background98.7 +/- 54.4bp
Strand Bias (log2 ratio + to - strand density)0.0
Multiplicity (# of sites on avg that occur together)1.01
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

EBF1(EBF)/Near-E2A-ChIP-Seq(GSE21512)/Homer

Match Rank:1
Score:0.91
Offset:-1
Orientation:reverse strand
Alignment:-CCCCTGGGGGBT
TCCCCTGGGGAC-

MA0154.2_EBF1/Jaspar

Match Rank:2
Score:0.83
Offset:0
Orientation:reverse strand
Alignment:CCCCTGGGGGBT
TCCCTGGGGAN-

PB0102.1_Zic2_1/Jaspar

Match Rank:3
Score:0.83
Offset:-3
Orientation:forward strand
Alignment:---CCCCTGGGGGBT
CCCCCCCGGGGGGGT

PB0103.1_Zic3_1/Jaspar

Match Rank:4
Score:0.82
Offset:-3
Orientation:forward strand
Alignment:---CCCCTGGGGGBT
CCCCCCCGGGGGGGT

PB0101.1_Zic1_1/Jaspar

Match Rank:5
Score:0.79
Offset:-3
Orientation:forward strand
Alignment:---CCCCTGGGGGBT
CACCCCCGGGGGGG-

MA0524.1_TFAP2C/Jaspar

Match Rank:6
Score:0.75
Offset:-1
Orientation:reverse strand
Alignment:-CCCCTGGGGGBT--
TGCCCTGGGGCNANN

MA0116.1_Zfp423/Jaspar

Match Rank:7
Score:0.74
Offset:-3
Orientation:reverse strand
Alignment:---CCCCTGGGGGBT
GCACCCCTGGGTGCC

EBF(EBF)/proBcell-EBF-ChIP-Seq(GSE21978)/Homer

Match Rank:8
Score:0.73
Offset:-2
Orientation:forward strand
Alignment:--CCCCTGGGGGBT
NGTCCCNNGGGA--

PB0085.1_Tcfap2a_1/Jaspar

Match Rank:9
Score:0.68
Offset:-2
Orientation:reverse strand
Alignment:--CCCCTGGGGGBT-
NTCCCCTCAGGGANT

PB0087.1_Tcfap2c_1/Jaspar

Match Rank:10
Score:0.68
Offset:-2
Orientation:forward strand
Alignment:--CCCCTGGGGGBT-
ATTGCCTGAGGCGAA