Information for motif19


Reverse Opposite:

p-value:1e-11
log p-value:-2.617e+01
Information Content per bp:1.792
Number of Target Sequences with motif662.0
Percentage of Target Sequences with motif11.49%
Number of Background Sequences with motif3872.1
Percentage of Background Sequences with motif8.82%
Average Position of motif in Targets95.8 +/- 56.9bp
Average Position of motif in Background100.9 +/- 57.6bp
Strand Bias (log2 ratio + to - strand density)-0.2
Multiplicity (# of sites on avg that occur together)1.10
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

TEAD4(TEA)/Tropoblast-Tead4-ChIP-Seq(GSE37350)/Homer

Match Rank:1
Score:0.87
Offset:-1
Orientation:forward strand
Alignment:-CGGGAATG-
CCWGGAATGY

TEAD(TEA)/Fibroblast-PU.1-ChIP-Seq(Unpublished)/Homer

Match Rank:2
Score:0.85
Offset:-1
Orientation:forward strand
Alignment:-CGGGAATG-
NCTGGAATGC

MA0090.1_TEAD1/Jaspar

Match Rank:3
Score:0.81
Offset:-2
Orientation:reverse strand
Alignment:--CGGGAATG--
CNGAGGAATGTG

E2F1(E2F)/Hela-E2F1-ChIP-Seq(GSE22478)/Homer

Match Rank:4
Score:0.72
Offset:-4
Orientation:forward strand
Alignment:----CGGGAATG
CWGGCGGGAA--

E2F6(E2F)/Hela-E2F6-ChIP-Seq(GSE31477)/Homer

Match Rank:5
Score:0.69
Offset:-2
Orientation:forward strand
Alignment:--CGGGAATG
GGCGGGAARN

MA0081.1_SPIB/Jaspar

Match Rank:6
Score:0.68
Offset:-1
Orientation:forward strand
Alignment:-CGGGAATG
AGAGGAA--

MA0158.1_HOXA5/Jaspar

Match Rank:7
Score:0.67
Offset:0
Orientation:forward strand
Alignment:CGGGAATG
CACTAATT

MA0470.1_E2F4/Jaspar

Match Rank:8
Score:0.67
Offset:-3
Orientation:forward strand
Alignment:---CGGGAATG
GGGCGGGAAGG

MF0001.1_ETS_class/Jaspar

Match Rank:9
Score:0.67
Offset:-1
Orientation:forward strand
Alignment:-CGGGAATG
ACCGGAAG-

Stat3(Stat)/mES-Stat3-ChIP-Seq(GSE11431)/Homer

Match Rank:10
Score:0.66
Offset:-4
Orientation:forward strand
Alignment:----CGGGAATG
CTTCCNGGAA--