Information for motif20


Reverse Opposite:

p-value:1e-11
log p-value:-2.536e+01
Information Content per bp:1.832
Number of Target Sequences with motif101.0
Percentage of Target Sequences with motif1.75%
Number of Background Sequences with motif363.1
Percentage of Background Sequences with motif0.83%
Average Position of motif in Targets96.8 +/- 58.4bp
Average Position of motif in Background106.0 +/- 60.8bp
Strand Bias (log2 ratio + to - strand density)0.0
Multiplicity (# of sites on avg that occur together)1.03
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

MA0103.2_ZEB1/Jaspar

Match Rank:1
Score:0.86
Offset:1
Orientation:reverse strand
Alignment:CCAGGTGCGG
-CAGGTGAGG

PB0089.1_Tcfe2a_1/Jaspar

Match Rank:2
Score:0.84
Offset:-4
Orientation:forward strand
Alignment:----CCAGGTGCGG---
ATCCACAGGTGCGAAAA

E2A-nearPU.1(HLH)/Bcell-PU.1-ChIP-Seq(GSE21512)/Homer

Match Rank:3
Score:0.82
Offset:-1
Orientation:reverse strand
Alignment:-CCAGGTGCGG
NNCAGGTGNN-

MF0007.1_bHLH(zip)_class/Jaspar

Match Rank:4
Score:0.69
Offset:-1
Orientation:forward strand
Alignment:-CCAGGTGCGG
ACCACGTG---

NPAS2(HLH)/Liver-NPAS2-ChIP-Seq(GSE39860)/Homer

Match Rank:5
Score:0.69
Offset:-1
Orientation:forward strand
Alignment:-CCAGGTGCGG
KCCACGTGAC-

MA0104.3_Mycn/Jaspar

Match Rank:6
Score:0.68
Offset:-1
Orientation:forward strand
Alignment:-CCAGGTGCGG
GCCACGTG---

Ptf1a(HLH)/Panc1-Ptf1a-ChIP-Seq(GSE47459)/Homer

Match Rank:7
Score:0.68
Offset:-2
Orientation:reverse strand
Alignment:--CCAGGTGCGG
NAACAGCTGT--

E2A(HLH)/proBcell-E2A-ChIP-Seq(GSE21978)/Homer

Match Rank:8
Score:0.68
Offset:0
Orientation:reverse strand
Alignment:CCAGGTGCGG
GCAGCTGTNN

MA0522.1_Tcf3/Jaspar

Match Rank:9
Score:0.68
Offset:-2
Orientation:reverse strand
Alignment:--CCAGGTGCGG
NTGCAGCTGTG-

MA0048.1_NHLH1/Jaspar

Match Rank:10
Score:0.68
Offset:-2
Orientation:reverse strand
Alignment:--CCAGGTGCGG
NCGCAGCTGCGN