Information for motif28


Reverse Opposite:

p-value:1e-5
log p-value:-1.321e+01
Information Content per bp:1.905
Number of Target Sequences with motif8.0
Percentage of Target Sequences with motif0.14%
Number of Background Sequences with motif6.1
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets89.0 +/- 58.6bp
Average Position of motif in Background122.4 +/- 68.7bp
Strand Bias (log2 ratio + to - strand density)0.7
Multiplicity (# of sites on avg that occur together)1.62
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

POL003.1_GC-box/Jaspar

Match Rank:1
Score:0.55
Offset:-1
Orientation:reverse strand
Alignment:-AGCTCTACCTAC-
NAGCCCCGCCCCCN

MA0474.1_Erg/Jaspar

Match Rank:2
Score:0.53
Offset:1
Orientation:reverse strand
Alignment:AGCTCTACCTAC
-CCACTTCCTGT

MA0473.1_ELF1/Jaspar

Match Rank:3
Score:0.53
Offset:2
Orientation:reverse strand
Alignment:AGCTCTACCTAC---
--CACTTCCTGNTTC

ETS1(ETS)/Jurkat-ETS1-ChIP-Seq(GSE17954)/Homer

Match Rank:4
Score:0.53
Offset:2
Orientation:reverse strand
Alignment:AGCTCTACCTAC
--CACTTCCTGT

POL010.1_DCE_S_III/Jaspar

Match Rank:5
Score:0.52
Offset:-1
Orientation:forward strand
Alignment:-AGCTCTACCTAC
CAGCC--------

MA0598.1_EHF/Jaspar

Match Rank:6
Score:0.52
Offset:3
Orientation:forward strand
Alignment:AGCTCTACCTAC
---CCTTCCTG-

PB0155.1_Osr2_2/Jaspar

Match Rank:7
Score:0.52
Offset:-1
Orientation:forward strand
Alignment:-AGCTCTACCTAC---
ACTTGCTACCTACACC

PU.1(ETS)/ThioMac-PU.1-ChIP-Seq(GSE21512)/Homer

Match Rank:8
Score:0.52
Offset:2
Orientation:reverse strand
Alignment:AGCTCTACCTAC
--CACTTCCTCT

PB0154.1_Osr1_2/Jaspar

Match Rank:9
Score:0.52
Offset:-1
Orientation:forward strand
Alignment:-AGCTCTACCTAC---
ACATGCTACCTAATAC

PB0161.1_Rxra_2/Jaspar

Match Rank:10
Score:0.51
Offset:0
Orientation:reverse strand
Alignment:AGCTCTACCTAC----
NNNNCAACCTTCGNGA