Information for motif30


Reverse Opposite:

p-value:1e-5
log p-value:-1.169e+01
Information Content per bp:1.542
Number of Target Sequences with motif5.0
Percentage of Target Sequences with motif0.09%
Number of Background Sequences with motif2.0
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets84.6 +/- 51.3bp
Average Position of motif in Background96.9 +/- 38.6bp
Strand Bias (log2 ratio + to - strand density)-0.4
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

Tbx20(T-box)/Heart-Tbx20-ChIP-Seq(GSE29636)/Homer

Match Rank:1
Score:0.68
Offset:0
Orientation:reverse strand
Alignment:GCTGTCGACA--
SCTGTCARCACC

PH0170.1_Tgif2/Jaspar

Match Rank:2
Score:0.62
Offset:-5
Orientation:forward strand
Alignment:-----GCTGTCGACA-
AACTAGCTGTCAATAC

PH0169.1_Tgif1/Jaspar

Match Rank:3
Score:0.59
Offset:-5
Orientation:reverse strand
Alignment:-----GCTGTCGACA--
NNNCAGCTGTCAATATN

PH0102.1_Meis1/Jaspar

Match Rank:4
Score:0.59
Offset:-5
Orientation:forward strand
Alignment:-----GCTGTCGACA-
AACGAGCTGTCAATAC

PH0105.1_Meis3/Jaspar

Match Rank:5
Score:0.58
Offset:-5
Orientation:forward strand
Alignment:-----GCTGTCGACA-
AATTACCTGTCAATAC

PB0117.1_Eomes_2/Jaspar

Match Rank:6
Score:0.58
Offset:-5
Orientation:forward strand
Alignment:-----GCTGTCGACA-
GCGGAGGTGTCGCCTC

PH0104.1_Meis2/Jaspar

Match Rank:7
Score:0.58
Offset:-5
Orientation:forward strand
Alignment:-----GCTGTCGACA-
AAAGACCTGTCAATAC

PH0141.1_Pknox2/Jaspar

Match Rank:8
Score:0.57
Offset:-5
Orientation:forward strand
Alignment:-----GCTGTCGACA-
AAGCACCTGTCAATAT

PB0004.1_Atf1_1/Jaspar

Match Rank:9
Score:0.57
Offset:-2
Orientation:reverse strand
Alignment:--GCTGTCGACA----
NCGATGACGTCATCGN

POL009.1_DCE_S_II/Jaspar

Match Rank:10
Score:0.56
Offset:0
Orientation:forward strand
Alignment:GCTGTCGACA
GCTGTG----