Information for motif31


Reverse Opposite:

p-value:1e-4
log p-value:-1.058e+01
Information Content per bp:1.530
Number of Target Sequences with motif19.0
Percentage of Target Sequences with motif0.33%
Number of Background Sequences with motif47.5
Percentage of Background Sequences with motif0.11%
Average Position of motif in Targets104.5 +/- 63.7bp
Average Position of motif in Background101.2 +/- 57.1bp
Strand Bias (log2 ratio + to - strand density)-1.1
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

MA0028.1_ELK1/Jaspar

Match Rank:1
Score:0.74
Offset:0
Orientation:forward strand
Alignment:CAACCGGA--
GAGCCGGAAG

MF0001.1_ETS_class/Jaspar

Match Rank:2
Score:0.73
Offset:2
Orientation:forward strand
Alignment:CAACCGGA--
--ACCGGAAG

Elk4(ETS)/Hela-Elk4-ChIP-Seq(GSE31477)/Homer

Match Rank:3
Score:0.73
Offset:2
Orientation:reverse strand
Alignment:CAACCGGA----
--RCCGGAARYN

ETV1(ETS)/GIST48-ETV1-ChIP-Seq(GSE22441)/Homer

Match Rank:4
Score:0.73
Offset:1
Orientation:forward strand
Alignment:CAACCGGA---
-AACCGGAAGT

PB0020.1_Gabpa_1/Jaspar

Match Rank:5
Score:0.72
Offset:-2
Orientation:forward strand
Alignment:--CAACCGGA-------
CAATACCGGAAGTGTAA

PB0077.1_Spdef_1/Jaspar

Match Rank:6
Score:0.71
Offset:-3
Orientation:reverse strand
Alignment:---CAACCGGA-----
AANNATCCGGATGTNN

ETS(ETS)/Promoter/Homer

Match Rank:7
Score:0.71
Offset:1
Orientation:forward strand
Alignment:CAACCGGA---
-AACCGGAAGT

ELF1(ETS)/Jurkat-ELF1-ChIP-Seq(SRA014231)/Homer

Match Rank:8
Score:0.71
Offset:1
Orientation:forward strand
Alignment:CAACCGGA---
-ANCCGGAAGT

Elk1(ETS)/Hela-Elk1-ChIP-Seq(GSE31477)/Homer

Match Rank:9
Score:0.70
Offset:2
Orientation:reverse strand
Alignment:CAACCGGA----
--RCCGGAAGTD

GABPA(ETS)/Jurkat-GABPa-ChIP-Seq(GSE17954)/Homer

Match Rank:10
Score:0.70
Offset:1
Orientation:forward strand
Alignment:CAACCGGA---
-NACCGGAAGT