Information for motif32


Reverse Opposite:

p-value:1e-3
log p-value:-8.736e+00
Information Content per bp:1.975
Number of Target Sequences with motif4.0
Percentage of Target Sequences with motif0.07%
Number of Background Sequences with motif3.0
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets119.4 +/- 55.5bp
Average Position of motif in Background96.6 +/- 36.0bp
Strand Bias (log2 ratio + to - strand density)10.0
Multiplicity (# of sites on avg that occur together)2.00
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0200.1_Zfp187_2/Jaspar

Match Rank:1
Score:0.76
Offset:-3
Orientation:reverse strand
Alignment:---GGGACAGGGGCT-
NNAGGGACAAGGGCNC

AR-halfsite(NR)/LNCaP-AR-ChIP-Seq(GSE27824)/Homer

Match Rank:2
Score:0.62
Offset:-3
Orientation:forward strand
Alignment:---GGGACAGGGGCT
CCAGGAACAG-----

PH0141.1_Pknox2/Jaspar

Match Rank:3
Score:0.60
Offset:-3
Orientation:reverse strand
Alignment:---GGGACAGGGGCT-
NNATTGACAGGTGCTT

MA0499.1_Myod1/Jaspar

Match Rank:4
Score:0.58
Offset:-1
Orientation:reverse strand
Alignment:-GGGACAGGGGCT
NGNGACAGCTGCN

RARg(NR)/ES-RARg-ChIP-Seq(GSE30538)/Homer

Match Rank:5
Score:0.58
Offset:0
Orientation:forward strand
Alignment:GGGACAGGGGCT
AGGTCAAGGTCA

POL009.1_DCE_S_II/Jaspar

Match Rank:6
Score:0.57
Offset:2
Orientation:reverse strand
Alignment:GGGACAGGGGCT
--CACAGN----

Sp1(Zf)/Promoter/Homer

Match Rank:7
Score:0.56
Offset:-1
Orientation:reverse strand
Alignment:-GGGACAGGGGCT
GGGGGCGGGGCC-

MA0155.1_INSM1/Jaspar

Match Rank:8
Score:0.55
Offset:1
Orientation:forward strand
Alignment:GGGACAGGGGCT-
-TGTCAGGGGGCG

MA0146.2_Zfx/Jaspar

Match Rank:9
Score:0.54
Offset:-1
Orientation:forward strand
Alignment:-GGGACAGGGGCT-
GGGGCCGAGGCCTG

MA0079.3_SP1/Jaspar

Match Rank:10
Score:0.54
Offset:0
Orientation:reverse strand
Alignment:GGGACAGGGGCT
GGGGGCGGGGC-