Information for motif5


Reverse Opposite:

p-value:1e-57
log p-value:-1.325e+02
Information Content per bp:1.455
Number of Target Sequences with motif775.0
Percentage of Target Sequences with motif13.45%
Number of Background Sequences with motif3222.0
Percentage of Background Sequences with motif7.34%
Average Position of motif in Targets98.2 +/- 53.2bp
Average Position of motif in Background100.9 +/- 58.5bp
Strand Bias (log2 ratio + to - strand density)0.1
Multiplicity (# of sites on avg that occur together)1.09
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0205.1_Zic1_2/Jaspar

Match Rank:1
Score:0.80
Offset:-2
Orientation:forward strand
Alignment:--WMWCAGCDGG---
CCACACAGCAGGAGA

PB0207.1_Zic3_2/Jaspar

Match Rank:2
Score:0.80
Offset:-2
Orientation:forward strand
Alignment:--WMWCAGCDGG---
GAGCACAGCAGGACA

PB0206.1_Zic2_2/Jaspar

Match Rank:3
Score:0.80
Offset:-2
Orientation:forward strand
Alignment:--WMWCAGCDGG---
CCACACAGCAGGAGA

Unknown-ESC-element/mES-Nanog-ChIP-Seq(GSE11724)/Homer

Match Rank:4
Score:0.79
Offset:1
Orientation:forward strand
Alignment:WMWCAGCDGG---
-CACAGCAGGGGG

Ap4(HLH)/AML-Tfap4-ChIP-Seq(GSE45738)/Homer

Match Rank:5
Score:0.70
Offset:0
Orientation:forward strand
Alignment:WMWCAGCDGG
NAHCAGCTGD

POL009.1_DCE_S_II/Jaspar

Match Rank:6
Score:0.70
Offset:1
Orientation:reverse strand
Alignment:WMWCAGCDGG
-CACAGN---

MafA(bZIP)/Islet-MafA-ChIP-Seq(GSE30298)/Homer

Match Rank:7
Score:0.69
Offset:-2
Orientation:reverse strand
Alignment:--WMWCAGCDGG
TGAGTCAGCA--

POL010.1_DCE_S_III/Jaspar

Match Rank:8
Score:0.68
Offset:3
Orientation:forward strand
Alignment:WMWCAGCDGG
---CAGCC--

MyoG(HLH)/C2C12-MyoG-ChIP-Seq(GSE36024)/Homer

Match Rank:9
Score:0.66
Offset:1
Orientation:forward strand
Alignment:WMWCAGCDGG
-AACAGCTG-

MA0521.1_Tcf12/Jaspar

Match Rank:10
Score:0.64
Offset:1
Orientation:forward strand
Alignment:WMWCAGCDGG--
-AACAGCTGCAG