Information for motif8


Reverse Opposite:

p-value:1e-17
log p-value:-4.137e+01
Information Content per bp:1.696
Number of Target Sequences with motif178.0
Percentage of Target Sequences with motif3.09%
Number of Background Sequences with motif653.6
Percentage of Background Sequences with motif1.49%
Average Position of motif in Targets95.5 +/- 53.0bp
Average Position of motif in Background103.9 +/- 58.5bp
Strand Bias (log2 ratio + to - strand density)0.1
Multiplicity (# of sites on avg that occur together)1.01
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0071.1_Sox4_1/Jaspar

Match Rank:1
Score:0.74
Offset:0
Orientation:forward strand
Alignment:CTGATAACAAAG-----
AGAAGAACAAAGGACTA

PB0061.1_Sox11_1/Jaspar

Match Rank:2
Score:0.73
Offset:0
Orientation:forward strand
Alignment:CTGATAACAAAG-----
ATAAGAACAAAGGACTA

PB0119.1_Foxa2_2/Jaspar

Match Rank:3
Score:0.70
Offset:-1
Orientation:forward strand
Alignment:-CTGATAACAAAG--
AAAAATAACAAACGG

MA0514.1_Sox3/Jaspar

Match Rank:4
Score:0.69
Offset:3
Orientation:reverse strand
Alignment:CTGATAACAAAG-
---AAAACAAAGG

PB0022.1_Gata5_1/Jaspar

Match Rank:5
Score:0.69
Offset:-4
Orientation:forward strand
Alignment:----CTGATAACAAAG-
TAAACTGATAAGAAGAT

MA0442.1_SOX10/Jaspar

Match Rank:6
Score:0.67
Offset:6
Orientation:reverse strand
Alignment:CTGATAACAAAG
------ACAAAG

MA0143.3_Sox2/Jaspar

Match Rank:7
Score:0.66
Offset:5
Orientation:reverse strand
Alignment:CTGATAACAAAG-
-----AACAAAGG

Sox3(HMG)/NPC-Sox3-ChIP-Seq(GSE33059)/Homer

Match Rank:8
Score:0.66
Offset:5
Orientation:reverse strand
Alignment:CTGATAACAAAG-
-----RACAAWGG

MA0515.1_Sox6/Jaspar

Match Rank:9
Score:0.65
Offset:3
Orientation:reverse strand
Alignment:CTGATAACAAAG-
---AAAACAATGG

Sox6(HMG)/Myotubes-Sox6-ChIP-Seq(GSE32627)/Homer

Match Rank:10
Score:0.65
Offset:3
Orientation:reverse strand
Alignment:CTGATAACAAAG-
---RNAACAATGG