Information for motif41


Reverse Opposite:

p-value:1e-2
log p-value:-6.527e+00
Information Content per bp:1.530
Number of Target Sequences with motif4.0
Percentage of Target Sequences with motif0.04%
Number of Background Sequences with motif2.8
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets103.8 +/- 55.9bp
Average Position of motif in Background83.4 +/- 14.8bp
Strand Bias (log2 ratio + to - strand density)-2.3
Multiplicity (# of sites on avg that occur together)3.00
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

MA0130.1_ZNF354C/Jaspar

Match Rank:1
Score:0.72
Offset:0
Orientation:forward strand
Alignment:ATCCACTGTA
ATCCAC----

Foxh1(Forkhead)/hESC-FOXH1-ChIP-Seq(GSE29422)/Homer

Match Rank:2
Score:0.65
Offset:-3
Orientation:reverse strand
Alignment:---ATCCACTGTA
SSAATCCACANN-

PB0091.1_Zbtb3_1/Jaspar

Match Rank:3
Score:0.65
Offset:-2
Orientation:forward strand
Alignment:--ATCCACTGTA-----
AATCGCACTGCATTCCG

PH0114.1_Nkx2-5/Jaspar

Match Rank:4
Score:0.63
Offset:-2
Orientation:forward strand
Alignment:--ATCCACTGTA----
TAAGCCACTTGAATTT

PH0115.1_Nkx2-6/Jaspar

Match Rank:5
Score:0.63
Offset:-2
Orientation:forward strand
Alignment:--ATCCACTGTA----
TAAGCCACTTAACATT

MA0479.1_FOXH1/Jaspar

Match Rank:6
Score:0.62
Offset:-4
Orientation:forward strand
Alignment:----ATCCACTGTA
TCCAATCCACA---

PH0171.1_Nkx2-1/Jaspar

Match Rank:7
Score:0.62
Offset:-2
Orientation:forward strand
Alignment:--ATCCACTGTA----
TAAGCCACTTGAAATT

PH0113.1_Nkx2-4/Jaspar

Match Rank:8
Score:0.61
Offset:-2
Orientation:forward strand
Alignment:--ATCCACTGTA----
TAAGCCACTTGAAATT

PB0048.1_Nkx3-1_1/Jaspar

Match Rank:9
Score:0.60
Offset:-3
Orientation:forward strand
Alignment:---ATCCACTGTA----
CTTAACCACTTAAGGAT

PB0051.1_Osr2_1/Jaspar

Match Rank:10
Score:0.59
Offset:-3
Orientation:reverse strand
Alignment:---ATCCACTGTA---
CNNNGCTACTGTANNN