Information for motif5


Reverse Opposite:

p-value:1e-46
log p-value:-1.066e+02
Information Content per bp:1.966
Number of Target Sequences with motif31.0
Percentage of Target Sequences with motif0.22%
Number of Background Sequences with motif1.8
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets109.7 +/- 52.6bp
Average Position of motif in Background29.6 +/- 0.5bp
Strand Bias (log2 ratio + to - strand density)-0.5
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

GATA-DR4(Zf)/iTreg-Gata3-ChIP-Seq(GSE20898)/Homer

Match Rank:1
Score:0.63
Offset:-2
Orientation:forward strand
Alignment:--ATGTGAAGAGAA-
AGATGKDGAGATAAG

PU.1-IRF(ETS:IRF)/Bcell-PU.1-ChIP-Seq(GSE21512)/Homer

Match Rank:2
Score:0.59
Offset:2
Orientation:forward strand
Alignment:ATGTGAAGAGAA--
--CGGAAGTGAAAC

PB0104.1_Zscan4_1/Jaspar

Match Rank:3
Score:0.57
Offset:-3
Orientation:forward strand
Alignment:---ATGTGAAGAGAA--
TACATGTGCACATAAAA

SA0003.1_at_AC_acceptor/Jaspar

Match Rank:4
Score:0.57
Offset:-1
Orientation:reverse strand
Alignment:-ATGTGAAGAGAA-------
AANGTGAAGNANNGTNAAGG

PB0026.1_Gm397_1/Jaspar

Match Rank:5
Score:0.57
Offset:-3
Orientation:forward strand
Alignment:---ATGTGAAGAGAA--
CAGATGTGCACATACGT

MA0029.1_Mecom/Jaspar

Match Rank:6
Score:0.55
Offset:0
Orientation:forward strand
Alignment:ATGTGAAGAGAA--
AAGATAAGATAACA

PB0018.1_Foxk1_1/Jaspar

Match Rank:7
Score:0.55
Offset:-3
Orientation:forward strand
Alignment:---ATGTGAAGAGAA--
AAAATGTAAACAAACAG

POL008.1_DCE_S_I/Jaspar

Match Rank:8
Score:0.55
Offset:3
Orientation:reverse strand
Alignment:ATGTGAAGAGAA
---NGAAGC---

Foxa2(Forkhead)/Liver-Foxa2-ChIP-Seq(GSE25694)/Homer

Match Rank:9
Score:0.54
Offset:-1
Orientation:reverse strand
Alignment:-ATGTGAAGAGAA
TATGTAAACANG-

MA0593.1_FOXP2/Jaspar

Match Rank:10
Score:0.54
Offset:0
Orientation:forward strand
Alignment:ATGTGAAGAGAA
AAGTAAACAAA-