Information for motif17


Reverse Opposite:

p-value:1e-17
log p-value:-3.950e+01
Information Content per bp:1.512
Number of Target Sequences with motif15.0
Percentage of Target Sequences with motif0.16%
Number of Background Sequences with motif2.9
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets80.1 +/- 62.9bp
Average Position of motif in Background43.8 +/- 19.3bp
Strand Bias (log2 ratio + to - strand density)-4.8
Multiplicity (# of sites on avg that occur together)1.93
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

AP-2alpha(AP2)/Hela-AP2alpha-ChIP-Seq(GSE31477)/Homer

Match Rank:1
Score:0.59
Offset:1
Orientation:reverse strand
Alignment:ACTCAYAGGGTA-
-GCCTCAGGGCAT

AP-2gamma(AP2)/MCF7-TFAP2C-ChIP-Seq(GSE21234)/Homer

Match Rank:2
Score:0.56
Offset:1
Orientation:forward strand
Alignment:ACTCAYAGGGTA-
-SCCTSAGGSCAW

MA0512.1_Rxra/Jaspar

Match Rank:3
Score:0.56
Offset:3
Orientation:forward strand
Alignment:ACTCAYAGGGTA--
---CAAAGGTCAGA

Erra(NR)/HepG2-Erra-ChIP-Seq(GSE31477)/Homer

Match Rank:4
Score:0.55
Offset:3
Orientation:forward strand
Alignment:ACTCAYAGGGTA-
---CAAAGGTCAG

MA0003.2_TFAP2A/Jaspar

Match Rank:5
Score:0.55
Offset:-3
Orientation:forward strand
Alignment:---ACTCAYAGGGTA
CATTGCCTCAGGGCA

MA0524.1_TFAP2C/Jaspar

Match Rank:6
Score:0.54
Offset:-3
Orientation:forward strand
Alignment:---ACTCAYAGGGTA
CATGGCCCCAGGGCA

MA0154.2_EBF1/Jaspar

Match Rank:7
Score:0.54
Offset:2
Orientation:reverse strand
Alignment:ACTCAYAGGGTA-
--TCCCTGGGGAN

MA0111.1_Spz1/Jaspar

Match Rank:8
Score:0.53
Offset:6
Orientation:forward strand
Alignment:ACTCAYAGGGTA-----
------AGGGTAACAGC

PB0128.1_Gcm1_2/Jaspar

Match Rank:9
Score:0.53
Offset:-1
Orientation:forward strand
Alignment:-ACTCAYAGGGTA----
TGCGCATAGGGGAGGAG

PB0133.1_Hic1_2/Jaspar

Match Rank:10
Score:0.52
Offset:1
Orientation:reverse strand
Alignment:ACTCAYAGGGTA-----
-NNNNTTGGGCACNNCN