Information for motif31


Reverse Opposite:

p-value:1e-9
log p-value:-2.116e+01
Information Content per bp:1.922
Number of Target Sequences with motif13.0
Percentage of Target Sequences with motif0.09%
Number of Background Sequences with motif3.5
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets88.2 +/- 50.3bp
Average Position of motif in Background24.9 +/- 11.7bp
Strand Bias (log2 ratio + to - strand density)-5.4
Multiplicity (# of sites on avg that occur together)3.58
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

POL009.1_DCE_S_II/Jaspar

Match Rank:1
Score:0.56
Offset:1
Orientation:forward strand
Alignment:CACTGTGCATCG
-GCTGTG-----

AR-halfsite(NR)/LNCaP-AR-ChIP-Seq(GSE27824)/Homer

Match Rank:2
Score:0.55
Offset:2
Orientation:reverse strand
Alignment:CACTGTGCATCG
--CTGTTCCTGG

MA0479.1_FOXH1/Jaspar

Match Rank:3
Score:0.54
Offset:3
Orientation:reverse strand
Alignment:CACTGTGCATCG--
---TGTGGATTNNN

PB0044.1_Mtf1_1/Jaspar

Match Rank:4
Score:0.53
Offset:-3
Orientation:forward strand
Alignment:---CACTGTGCATCG-
GGGCCGTGTGCAAAAA

PB0132.1_Hbp1_2/Jaspar

Match Rank:5
Score:0.53
Offset:-6
Orientation:forward strand
Alignment:------CACTGTGCATCG
TGTTCCCATTGTGTACT-

MA0078.1_Sox17/Jaspar

Match Rank:6
Score:0.53
Offset:-2
Orientation:forward strand
Alignment:--CACTGTGCATCG
CTCATTGTC-----

Foxh1(Forkhead)/hESC-FOXH1-ChIP-Seq(GSE29422)/Homer

Match Rank:7
Score:0.53
Offset:1
Orientation:forward strand
Alignment:CACTGTGCATCG-
-NNTGTGGATTSS

PH0148.1_Pou3f3/Jaspar

Match Rank:8
Score:0.52
Offset:-2
Orientation:reverse strand
Alignment:--CACTGTGCATCG---
TNNATTATGCATANNTT

PB0099.1_Zfp691_1/Jaspar

Match Rank:9
Score:0.52
Offset:-8
Orientation:reverse strand
Alignment:--------CACTGTGCATCG
NNNNTGAGCACTGTNNG---

PB0091.1_Zbtb3_1/Jaspar

Match Rank:10
Score:0.52
Offset:0
Orientation:reverse strand
Alignment:CACTGTGCATCG-----
NNNANTGCAGTGCNNTT