Information for motif2


Reverse Opposite:

p-value:1e-422
log p-value:-9.728e+02
Information Content per bp:1.656
Number of Target Sequences with motif9013.0
Percentage of Target Sequences with motif33.05%
Number of Background Sequences with motif5812.3
Percentage of Background Sequences with motif21.51%
Average Position of motif in Targets99.7 +/- 54.3bp
Average Position of motif in Background92.6 +/- 57.5bp
Strand Bias (log2 ratio + to - strand density)0.0
Multiplicity (# of sites on avg that occur together)1.52
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

MA0079.3_SP1/Jaspar

Match Rank:1
Score:0.97
Offset:0
Orientation:forward strand
Alignment:GCCCCGCCCCCH
GCCCCGCCCCC-

POL003.1_GC-box/Jaspar

Match Rank:2
Score:0.96
Offset:-2
Orientation:reverse strand
Alignment:--GCCCCGCCCCCH
NAGCCCCGCCCCCN

MA0599.1_KLF5/Jaspar

Match Rank:3
Score:0.95
Offset:0
Orientation:forward strand
Alignment:GCCCCGCCCCCH
GCCCCGCCCC--

Sp1(Zf)/Promoter/Homer

Match Rank:4
Score:0.94
Offset:-1
Orientation:forward strand
Alignment:-GCCCCGCCCCCH
GGCCCCGCCCCC-

MA0516.1_SP2/Jaspar

Match Rank:5
Score:0.94
Offset:0
Orientation:forward strand
Alignment:GCCCCGCCCCCH---
GCCCCGCCCCCTCCC

PB0039.1_Klf7_1/Jaspar

Match Rank:6
Score:0.90
Offset:-3
Orientation:forward strand
Alignment:---GCCCCGCCCCCH-
TCGACCCCGCCCCTAT

MA0039.2_Klf4/Jaspar

Match Rank:7
Score:0.90
Offset:0
Orientation:reverse strand
Alignment:GCCCCGCCCCCH
GCCCCACCCA--

KLF5(Zf)/LoVo-KLF5-ChIP-Seq(GSE49402)/Homer

Match Rank:8
Score:0.89
Offset:0
Orientation:reverse strand
Alignment:GCCCCGCCCCCH
GCCMCRCCCH--

PB0076.1_Sp4_1/Jaspar

Match Rank:9
Score:0.85
Offset:-1
Orientation:forward strand
Alignment:-GCCCCGCCCCCH----
GGTCCCGCCCCCTTCTC

MA0162.2_EGR1/Jaspar

Match Rank:10
Score:0.84
Offset:0
Orientation:forward strand
Alignment:GCCCCGCCCCCH--
CCCCCGCCCCCGCC