Information for motif5


Reverse Opposite:

p-value:1e-43
log p-value:-9.979e+01
Information Content per bp:1.771
Number of Target Sequences with motif1674.0
Percentage of Target Sequences with motif17.47%
Number of Background Sequences with motif5049.9
Percentage of Background Sequences with motif12.54%
Average Position of motif in Targets99.7 +/- 54.7bp
Average Position of motif in Background99.6 +/- 58.3bp
Strand Bias (log2 ratio + to - strand density)-0.0
Multiplicity (# of sites on avg that occur together)1.16
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

CRX(Homeobox)/Retina-Crx-ChIP-Seq(GSE20012)/Homer

Match Rank:1
Score:0.89
Offset:0
Orientation:forward strand
Alignment:GCTAATCT
GCTAATCC

Gata4(Zf)/Heart-Gata4-ChIP-Seq(GSE35151)/Homer

Match Rank:2
Score:0.86
Offset:0
Orientation:reverse strand
Alignment:GCTAATCT--
YCTTATCWVN

Gata2(Zf)/K562-GATA2-ChIP-Seq(GSE18829)/Homer

Match Rank:3
Score:0.83
Offset:-1
Orientation:forward strand
Alignment:-GCTAATCT-
NNCTTATCTN

Gata1(Zf)/K562-GATA1-ChIP-Seq(GSE18829)/Homer

Match Rank:4
Score:0.82
Offset:-1
Orientation:reverse strand
Alignment:-GCTAATCT-
NCCTTATCTG

PB0023.1_Gata6_1/Jaspar

Match Rank:5
Score:0.82
Offset:-4
Orientation:reverse strand
Alignment:----GCTAATCT-----
NNANTCTTATCTNNNNN

GATA3(Zf)/iTreg-Gata3-ChIP-Seq(GSE20898)/Homer

Match Rank:6
Score:0.81
Offset:0
Orientation:reverse strand
Alignment:GCTAATCT
YSTTATCT

MA0037.2_GATA3/Jaspar

Match Rank:7
Score:0.80
Offset:0
Orientation:reverse strand
Alignment:GCTAATCT
TCTTATCT

PH0035.1_Gsc/Jaspar

Match Rank:8
Score:0.79
Offset:-4
Orientation:forward strand
Alignment:----GCTAATCT-----
AATCGTTAATCCCTTTA

MA0482.1_Gata4/Jaspar

Match Rank:9
Score:0.79
Offset:0
Orientation:forward strand
Alignment:GCTAATCT---
TCTTATCTCCC

PH0015.1_Crx/Jaspar

Match Rank:10
Score:0.79
Offset:-2
Orientation:reverse strand
Alignment:--GCTAATCT------
AGGCTAATCCCCAANG