p-value: | 1e-29 |
log p-value: | -6.879e+01 |
Information Content per bp: | 1.979 |
Number of Target Sequences with motif | 22.0 |
Percentage of Target Sequences with motif | 0.15% |
Number of Background Sequences with motif | 1.9 |
Percentage of Background Sequences with motif | 0.01% |
Average Position of motif in Targets | 103.1 +/- 41.1bp |
Average Position of motif in Background | 152.0 +/- 6.6bp |
Strand Bias (log2 ratio + to - strand density) | -0.5 |
Multiplicity (# of sites on avg that occur together) | 1.00 |
Motif File: | file (matrix) reverse opposite |
PDF Format Logos: | forward logo reverse opposite |
MA0124.1_NKX3-1/Jaspar
Match Rank: | 1 |
Score: | 0.67 |
Offset: | 2 |
Orientation: | forward strand |
Alignment: | GAATACTAAC --ATACTTA- |
|

|
|
MA0046.1_HNF1A/Jaspar
Match Rank: | 2 |
Score: | 0.62 |
Offset: | -3 |
Orientation: | reverse strand |
Alignment: | ---GAATACTAAC- GNTAATNATTAACC |
|

|
|
PB0106.1_Arid5a_2/Jaspar
Match Rank: | 3 |
Score: | 0.59 |
Offset: | -4 |
Orientation: | forward strand |
Alignment: | ----GAATACTAAC--- CATACAATACGAAATAA |
|

|
|
MA0032.1_FOXC1/Jaspar
Match Rank: | 4 |
Score: | 0.58 |
Offset: | 3 |
Orientation: | reverse strand |
Alignment: | GAATACTAAC- ---TACTNNNN |
|

|
|
PB0119.1_Foxa2_2/Jaspar
Match Rank: | 5 |
Score: | 0.57 |
Offset: | 1 |
Orientation: | forward strand |
Alignment: | GAATACTAAC------ -AAAAATAACAAACGG |
|

|
|
SD0001.1_at_AC_acceptor/Jaspar
Match Rank: | 6 |
Score: | 0.54 |
Offset: | 2 |
Orientation: | reverse strand |
Alignment: | GAATACTAAC--- --NNACTTACCTN |
|

|
|
Nkx3.1(Homeobox)/LNCaP-Nkx3.1-ChIP-Seq(GSE28264)/Homer
Match Rank: | 7 |
Score: | 0.54 |
Offset: | 0 |
Orientation: | forward strand |
Alignment: | GAATACTAAC AAGCACTTAA |
|

|
|
PB0122.1_Foxk1_2/Jaspar
Match Rank: | 8 |
Score: | 0.54 |
Offset: | -1 |
Orientation: | forward strand |
Alignment: | -GAATACTAAC---- CAAACAACAACACCT |
|

|
|
PB0002.1_Arid5a_1/Jaspar
Match Rank: | 9 |
Score: | 0.53 |
Offset: | -5 |
Orientation: | reverse strand |
Alignment: | -----GAATACTAAC NNTNNCAATATTAG- |
|

|
|
PB0194.1_Zbtb12_2/Jaspar
Match Rank: | 10 |
Score: | 0.52 |
Offset: | -1 |
Orientation: | reverse strand |
Alignment: | -GAATACTAAC---- AGNGTTCTAATGANN |
|

|
|