Information for motif19


Reverse Opposite:

p-value:1e-19
log p-value:-4.554e+01
Information Content per bp:1.530
Number of Target Sequences with motif16.0
Percentage of Target Sequences with motif0.11%
Number of Background Sequences with motif0.0
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets54.5 +/- 48.1bp
Average Position of motif in Background0.0 +/- 0.0bp
Strand Bias (log2 ratio + to - strand density)2.8
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0120.1_Foxj1_2/Jaspar

Match Rank:1
Score:0.74
Offset:-4
Orientation:forward strand
Alignment:----CACAACATTA-
ATGTCACAACAACAC

PB0121.1_Foxj3_2/Jaspar

Match Rank:2
Score:0.72
Offset:-5
Orientation:forward strand
Alignment:-----CACAACATTA--
AACACCAAAACAAAGGA

PB0141.1_Isgf3g_2/Jaspar

Match Rank:3
Score:0.67
Offset:-1
Orientation:forward strand
Alignment:-CACAACATTA---
GCAAAACATTACTA

PB0122.1_Foxk1_2/Jaspar

Match Rank:4
Score:0.64
Offset:-5
Orientation:forward strand
Alignment:-----CACAACATTA
CAAACAACAACACCT

PB0002.1_Arid5a_1/Jaspar

Match Rank:5
Score:0.63
Offset:-3
Orientation:reverse strand
Alignment:---CACAACATTA-
NNTNNCAATATTAG

PB0123.1_Foxl1_2/Jaspar

Match Rank:6
Score:0.62
Offset:-4
Orientation:forward strand
Alignment:----CACAACATTA--
ATATCAAAACAAAACA

MA0133.1_BRCA1/Jaspar

Match Rank:7
Score:0.61
Offset:1
Orientation:forward strand
Alignment:CACAACATTA
-ACAACAC--

MA0132.1_Pdx1/Jaspar

Match Rank:8
Score:0.61
Offset:5
Orientation:reverse strand
Alignment:CACAACATTA-
-----AATTAG

PB0062.1_Sox12_1/Jaspar

Match Rank:9
Score:0.60
Offset:-3
Orientation:reverse strand
Alignment:---CACAACATTA-
NTTNAGAACAATTA

Nkx6.1(Homeobox)/Islet-Nkx6.1-ChIP-Seq(GSE40975)/Homer

Match Rank:10
Score:0.59
Offset:4
Orientation:reverse strand
Alignment:CACAACATTA--
----YCATTAMC