p-value: | 1e-112 |
log p-value: | -2.589e+02 |
Information Content per bp: | 1.628 |
Number of Target Sequences with motif | 2005.0 |
Percentage of Target Sequences with motif | 7.35% |
Number of Background Sequences with motif | 1164.5 |
Percentage of Background Sequences with motif | 4.31% |
Average Position of motif in Targets | 100.9 +/- 54.9bp |
Average Position of motif in Background | 99.1 +/- 61.4bp |
Strand Bias (log2 ratio + to - strand density) | 0.0 |
Multiplicity (# of sites on avg that occur together) | 1.08 |
Motif File: | file (matrix) reverse opposite |
PDF Format Logos: | forward logo reverse opposite |
Lhx2(Homeobox)/HFSC-Lhx2-ChIP-Seq(GSE48068)/Homer
Match Rank: | 1 |
Score: | 0.89 |
Offset: | 1 |
Orientation: | forward strand |
Alignment: | CTAATTAGCA -TAATTAGN- |
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PH0131.1_Pax4/Jaspar
Match Rank: | 2 |
Score: | 0.89 |
Offset: | -4 |
Orientation: | forward strand |
Alignment: | ----CTAATTAGCA--- TGAACTAATTAGCCCAC |
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PB0031.1_Hoxa3_1/Jaspar
Match Rank: | 3 |
Score: | 0.89 |
Offset: | -1 |
Orientation: | reverse strand |
Alignment: | -CTAATTAGCA--- GTTAATTANCTCNN |
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PH0155.1_Prrx2/Jaspar
Match Rank: | 4 |
Score: | 0.88 |
Offset: | -5 |
Orientation: | reverse strand |
Alignment: | -----CTAATTAGCA-- NTTCGCTAATTAGCTNT |
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Lhx3(Homeobox)/Neuron-Lhx3-ChIP-Seq(GSE31456)/Homer
Match Rank: | 5 |
Score: | 0.88 |
Offset: | 0 |
Orientation: | reverse strand |
Alignment: | CTAATTAGCA YTAATTAVHT |
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PH0097.1_Lhx6_2/Jaspar
Match Rank: | 6 |
Score: | 0.88 |
Offset: | -4 |
Orientation: | forward strand |
Alignment: | ----CTAATTAGCA--- TCCACTAATTAGCGGTT |
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PH0050.1_Hoxa3/Jaspar
Match Rank: | 7 |
Score: | 0.87 |
Offset: | -1 |
Orientation: | reverse strand |
Alignment: | -CTAATTAGCA--- ACTAATTANCNCNA |
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PH0074.1_Hoxd1/Jaspar
Match Rank: | 8 |
Score: | 0.86 |
Offset: | -4 |
Orientation: | forward strand |
Alignment: | ----CTAATTAGCA--- TAAACTAATTAGCTGTA |
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PH0160.1_Shox2/Jaspar
Match Rank: | 9 |
Score: | 0.86 |
Offset: | -5 |
Orientation: | reverse strand |
Alignment: | -----CTAATTAGCA-- NNNAATTAATTAANNNG |
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PH0032.1_Evx2/Jaspar
Match Rank: | 10 |
Score: | 0.86 |
Offset: | -4 |
Orientation: | reverse strand |
Alignment: | ----CTAATTAGCA--- ANCGCTAATTAGCGGTN |
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