Information for motif24


Reverse Opposite:

p-value:1e-9
log p-value:-2.297e+01
Information Content per bp:1.821
Number of Target Sequences with motif10.0
Percentage of Target Sequences with motif0.10%
Number of Background Sequences with motif2.7
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets106.9 +/- 52.7bp
Average Position of motif in Background99.9 +/- 43.2bp
Strand Bias (log2 ratio + to - strand density)1.8
Multiplicity (# of sites on avg that occur together)2.20
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0208.1_Zscan4_2/Jaspar

Match Rank:1
Score:0.65
Offset:-4
Orientation:forward strand
Alignment:----GCACATAACCTC
CGAAGCACACAAAATA

SD0003.1_at_AC_acceptor/Jaspar

Match Rank:2
Score:0.55
Offset:1
Orientation:forward strand
Alignment:GCACATAACCTC
-AAGATATCCTT

RUNX1(Runt)/Jurkat-RUNX1-ChIP-Seq(GSE29180)/Homer

Match Rank:3
Score:0.53
Offset:5
Orientation:forward strand
Alignment:GCACATAACCTC---
-----AAACCACANN

PB0104.1_Zscan4_1/Jaspar

Match Rank:4
Score:0.52
Offset:-7
Orientation:forward strand
Alignment:-------GCACATAACCTC
TACATGTGCACATAAAA--

MA0488.1_JUN/Jaspar

Match Rank:5
Score:0.52
Offset:4
Orientation:reverse strand
Alignment:GCACATAACCTC-----
----ATGACATCATCNN

PB0130.1_Gm397_2/Jaspar

Match Rank:6
Score:0.52
Offset:-4
Orientation:forward strand
Alignment:----GCACATAACCTC
AGCGGCACACACGCAA

MA0111.1_Spz1/Jaspar

Match Rank:7
Score:0.51
Offset:0
Orientation:reverse strand
Alignment:GCACATAACCTC
GCTGTTACCCT-

MA0036.2_GATA2/Jaspar

Match Rank:8
Score:0.51
Offset:0
Orientation:reverse strand
Alignment:GCACATAACCTC--
NCAGATAAGAANNN

GATA3(Zf)/iTreg-Gata3-ChIP-Seq(GSE20898)/Homer

Match Rank:9
Score:0.50
Offset:2
Orientation:forward strand
Alignment:GCACATAACCTC
--AGATAASR--

MA0492.1_JUND_(var.2)/Jaspar

Match Rank:10
Score:0.50
Offset:3
Orientation:reverse strand
Alignment:GCACATAACCTC------
---NATGACATCATCNNN