Information for motif40


Reverse Opposite:

p-value:1e-3
log p-value:-8.115e+00
Information Content per bp:1.944
Number of Target Sequences with motif16.0
Percentage of Target Sequences with motif0.17%
Number of Background Sequences with motif24.2
Percentage of Background Sequences with motif0.06%
Average Position of motif in Targets97.2 +/- 59.0bp
Average Position of motif in Background86.2 +/- 52.9bp
Strand Bias (log2 ratio + to - strand density)-2.0
Multiplicity (# of sites on avg that occur together)2.33
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

Smad2(MAD)/ES-SMAD2-ChIP-Seq(GSE29422)/Homer

Match Rank:1
Score:0.62
Offset:-2
Orientation:reverse strand
Alignment:--AGACAGATAC
CCAGACAG----

MA0035.3_Gata1/Jaspar

Match Rank:2
Score:0.62
Offset:2
Orientation:reverse strand
Alignment:AGACAGATAC---
--ANAGATAAGAA

MA0042.1_FOXI1/Jaspar

Match Rank:3
Score:0.61
Offset:0
Orientation:reverse strand
Alignment:AGACAGATAC--
AAACAAACANNC

MA0036.2_GATA2/Jaspar

Match Rank:4
Score:0.59
Offset:2
Orientation:reverse strand
Alignment:AGACAGATAC------
--NCAGATAAGAANNN

GATA3(Zf)/iTreg-Gata3-ChIP-Seq(GSE20898)/Homer

Match Rank:5
Score:0.59
Offset:4
Orientation:forward strand
Alignment:AGACAGATAC--
----AGATAASR

MA0482.1_Gata4/Jaspar

Match Rank:6
Score:0.59
Offset:1
Orientation:reverse strand
Alignment:AGACAGATAC--
-NNGAGATAAGA

PB0036.1_Irf6_1/Jaspar

Match Rank:7
Score:0.58
Offset:-1
Orientation:forward strand
Alignment:-AGACAGATAC------
CTGATCGAAACCAAAGT

PB0198.1_Zfp128_2/Jaspar

Match Rank:8
Score:0.58
Offset:-3
Orientation:reverse strand
Alignment:---AGACAGATAC-
NNTATANATATACN

Gata1(Zf)/K562-GATA1-ChIP-Seq(GSE18829)/Homer

Match Rank:9
Score:0.57
Offset:3
Orientation:forward strand
Alignment:AGACAGATAC---
---CAGATAAGGN

Smad4(MAD)/ESC-SMAD4-ChIP-Seq(GSE29422)/Homer

Match Rank:10
Score:0.57
Offset:-2
Orientation:reverse strand
Alignment:--AGACAGATAC
CCAGACRSVB--