Information for motif9


Reverse Opposite:

p-value:1e-38
log p-value:-8.784e+01
Information Content per bp:1.605
Number of Target Sequences with motif3247.0
Percentage of Target Sequences with motif22.67%
Number of Background Sequences with motif6497.1
Percentage of Background Sequences with motif18.35%
Average Position of motif in Targets98.8 +/- 56.3bp
Average Position of motif in Background101.0 +/- 58.1bp
Strand Bias (log2 ratio + to - strand density)-0.1
Multiplicity (# of sites on avg that occur together)1.17
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0084.1_Tcf7l2_1/Jaspar

Match Rank:1
Score:0.94
Offset:-5
Orientation:forward strand
Alignment:-----CTTTGATC----
ATTTCCTTTGATCTATA

PB0040.1_Lef1_1/Jaspar

Match Rank:2
Score:0.93
Offset:-5
Orientation:forward strand
Alignment:-----CTTTGATC----
AATCCCTTTGATCTATC

PB0082.1_Tcf3_1/Jaspar

Match Rank:3
Score:0.91
Offset:-5
Orientation:reverse strand
Alignment:-----CTTTGATC----
NNTTCCTTTGATCTANA

MA0523.1_TCF7L2/Jaspar

Match Rank:4
Score:0.89
Offset:-3
Orientation:reverse strand
Alignment:---CTTTGATC---
TNCCTTTGATCTTN

Tcf4(HMG)/Hct116-Tcf4-ChIP-Seq(SRA012054)/Homer

Match Rank:5
Score:0.89
Offset:-3
Orientation:reverse strand
Alignment:---CTTTGATC-
TNCCTTTGATGT

PB0083.1_Tcf7_1/Jaspar

Match Rank:6
Score:0.89
Offset:-5
Orientation:reverse strand
Alignment:-----CTTTGATC----
NNTTCCTTTGATCTNNA

Tcf3(HMG)/mES-Tcf3-ChIP-Seq(GSE11724)/Homer

Match Rank:7
Score:0.87
Offset:-1
Orientation:reverse strand
Alignment:-CTTTGATC-
CCTTTGATGT

TCFL2(HMG)/K562-TCF7L2-ChIP-Seq(GSE29196)/Homer

Match Rank:8
Score:0.81
Offset:-1
Orientation:reverse strand
Alignment:-CTTTGATC-
CCTTTGAWGT

MA0151.1_ARID3A/Jaspar

Match Rank:9
Score:0.80
Offset:1
Orientation:reverse strand
Alignment:CTTTGATC
-TTTAAT-

PB0071.1_Sox4_1/Jaspar

Match Rank:10
Score:0.77
Offset:-5
Orientation:reverse strand
Alignment:-----CTTTGATC----
TNNTCCTTTGTTCTNNT