Information for motif10


Reverse Opposite:

p-value:1e-83
log p-value:-1.932e+02
Information Content per bp:1.969
Number of Target Sequences with motif61.0
Percentage of Target Sequences with motif0.22%
Number of Background Sequences with motif1.3
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets100.0 +/- 52.7bp
Average Position of motif in Background167.0 +/- 0.0bp
Strand Bias (log2 ratio + to - strand density)-0.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

AP-2gamma(AP2)/MCF7-TFAP2C-ChIP-Seq(GSE21234)/Homer

Match Rank:1
Score:0.61
Offset:-4
Orientation:reverse strand
Alignment:----CCTTAGGGTTAG
WTGSCCTSAGGS----

AP-2alpha(AP2)/Hela-AP2alpha-ChIP-Seq(GSE31477)/Homer

Match Rank:2
Score:0.60
Offset:-1
Orientation:reverse strand
Alignment:-CCTTAGGGTTAG
GCCTCAGGGCAT-

CRX(Homeobox)/Retina-Crx-ChIP-Seq(GSE20012)/Homer

Match Rank:3
Score:0.59
Offset:5
Orientation:reverse strand
Alignment:CCTTAGGGTTAG-
-----GGATTAGC

PB0086.1_Tcfap2b_1/Jaspar

Match Rank:4
Score:0.57
Offset:-3
Orientation:reverse strand
Alignment:---CCTTAGGGTTAG
NTGCCCTAGGGCAA-

MA0003.2_TFAP2A/Jaspar

Match Rank:5
Score:0.57
Offset:-5
Orientation:forward strand
Alignment:-----CCTTAGGGTTAG
CATTGCCTCAGGGCA--

PB0087.1_Tcfap2c_1/Jaspar

Match Rank:6
Score:0.57
Offset:-4
Orientation:reverse strand
Alignment:----CCTTAGGGTTAG
NTCGCCTCAGGCAAT-

PB0085.1_Tcfap2a_1/Jaspar

Match Rank:7
Score:0.57
Offset:-4
Orientation:reverse strand
Alignment:----CCTTAGGGTTAG
NTCCCCTCAGGGANT-

MA0116.1_Zfp423/Jaspar

Match Rank:8
Score:0.56
Offset:-4
Orientation:forward strand
Alignment:----CCTTAGGGTTAG
GGCACCCAGGGGTGC-

PB0088.1_Tcfap2e_1/Jaspar

Match Rank:9
Score:0.56
Offset:-4
Orientation:reverse strand
Alignment:----CCTTAGGGTTAG
NTNGCCTCAGGCNNN-

MA0524.1_TFAP2C/Jaspar

Match Rank:10
Score:0.55
Offset:-5
Orientation:forward strand
Alignment:-----CCTTAGGGTTAG
CATGGCCCCAGGGCA--