Information for motif13


Reverse Opposite:

p-value:1e-82
log p-value:-1.906e+02
Information Content per bp:1.703
Number of Target Sequences with motif1129.0
Percentage of Target Sequences with motif4.14%
Number of Background Sequences with motif598.5
Percentage of Background Sequences with motif2.21%
Average Position of motif in Targets96.3 +/- 55.2bp
Average Position of motif in Background92.7 +/- 57.5bp
Strand Bias (log2 ratio + to - strand density)0.0
Multiplicity (# of sites on avg that occur together)1.08
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

GFY(?)/Promoter/Homer

Match Rank:1
Score:0.87
Offset:-2
Orientation:forward strand
Alignment:--TACAATTCCC
ACTACAATTCCC

GFY-Staf/Promoters/Homer

Match Rank:2
Score:0.72
Offset:-3
Orientation:forward strand
Alignment:---TACAATTCCC-------
AACTACAATTCCCAGAATGC

PB0165.1_Sox11_2/Jaspar

Match Rank:3
Score:0.63
Offset:-5
Orientation:reverse strand
Alignment:-----TACAATTCCC
NNCNNAACAATTNT-

MA0019.1_Ddit3::Cebpa/Jaspar

Match Rank:4
Score:0.63
Offset:-3
Orientation:forward strand
Alignment:---TACAATTCCC
AGATGCAATCCC-

PB0175.1_Sox4_2/Jaspar

Match Rank:5
Score:0.61
Offset:-5
Orientation:reverse strand
Alignment:-----TACAATTCCC--
TNCNNAACAATTTTTNC

MF0011.1_HMG_class/Jaspar

Match Rank:6
Score:0.61
Offset:0
Orientation:reverse strand
Alignment:TACAATTCCC
AACAAT----

MA0084.1_SRY/Jaspar

Match Rank:7
Score:0.60
Offset:-3
Orientation:forward strand
Alignment:---TACAATTCCC
GTAAACAAT----

PU.1(ETS)/ThioMac-PU.1-ChIP-Seq(GSE21512)/Homer

Match Rank:8
Score:0.60
Offset:2
Orientation:reverse strand
Alignment:TACAATTCCC--
--CACTTCCTCT

Sox6(HMG)/Myotubes-Sox6-ChIP-Seq(GSE32627)/Homer

Match Rank:9
Score:0.59
Offset:-2
Orientation:reverse strand
Alignment:--TACAATTCCC
RNAACAATGG--

MA0087.1_Sox5/Jaspar

Match Rank:10
Score:0.58
Offset:-1
Orientation:reverse strand
Alignment:-TACAATTCCC
NAACAAT----