Information for motif12


Reverse Opposite:

p-value:1e-23
log p-value:-5.388e+01
Information Content per bp:1.530
Number of Target Sequences with motif16.0
Percentage of Target Sequences with motif0.17%
Number of Background Sequences with motif1.6
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets99.4 +/- 60.8bp
Average Position of motif in Background153.1 +/- 32.9bp
Strand Bias (log2 ratio + to - strand density)0.4
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0029.1_Hic1_1/Jaspar

Match Rank:1
Score:0.63
Offset:-1
Orientation:reverse strand
Alignment:-GTAGGTTGAC-----
NGTAGGTTGGCATNNN

Srebp2(HLH)/HepG2-Srebp2-ChIP-Seq(GSE31477)/Homer

Match Rank:2
Score:0.63
Offset:0
Orientation:reverse strand
Alignment:GTAGGTTGAC--
GTGGCGTGACNG

PB0161.1_Rxra_2/Jaspar

Match Rank:3
Score:0.62
Offset:-4
Orientation:forward strand
Alignment:----GTAGGTTGAC--
TCGCGAAGGTTGTACT

MA0595.1_SREBF1/Jaspar

Match Rank:4
Score:0.61
Offset:0
Orientation:reverse strand
Alignment:GTAGGTTGAC
GTGGGGTGAT

Srebp1a(HLH)/HepG2-Srebp1a-ChIP-Seq(GSE31477)/Homer

Match Rank:5
Score:0.58
Offset:0
Orientation:reverse strand
Alignment:GTAGGTTGAC
ATGGGGTGAT

POL007.1_BREd/Jaspar

Match Rank:6
Score:0.58
Offset:0
Orientation:forward strand
Alignment:GTAGGTTGAC
GTTTGTT---

MA0596.1_SREBF2/Jaspar

Match Rank:7
Score:0.58
Offset:0
Orientation:forward strand
Alignment:GTAGGTTGAC
ATGGGGTGAT

PB0109.1_Bbx_2/Jaspar

Match Rank:8
Score:0.56
Offset:-1
Orientation:forward strand
Alignment:-GTAGGTTGAC------
TGATTGTTAACAGTTGG

Six1(Homeobox)/Myoblast-Six1-ChIP-Chip(GSE20150)/Homer

Match Rank:9
Score:0.56
Offset:0
Orientation:reverse strand
Alignment:GTAGGTTGAC--
GWAAYHTGABMC

MA0117.1_Mafb/Jaspar

Match Rank:10
Score:0.56
Offset:4
Orientation:forward strand
Alignment:GTAGGTTGAC--
----GCTGACGC