Information for motif30


Reverse Opposite:

p-value:1e-6
log p-value:-1.414e+01
Information Content per bp:1.530
Number of Target Sequences with motif7.0
Percentage of Target Sequences with motif0.07%
Number of Background Sequences with motif2.5
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets71.5 +/- 34.2bp
Average Position of motif in Background108.2 +/- 72.7bp
Strand Bias (log2 ratio + to - strand density)-0.3
Multiplicity (# of sites on avg that occur together)1.57
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

MA0111.1_Spz1/Jaspar

Match Rank:1
Score:0.65
Offset:-2
Orientation:reverse strand
Alignment:--TGCGACCCTC
GCTGTTACCCT-

PB0029.1_Hic1_1/Jaspar

Match Rank:2
Score:0.63
Offset:-4
Orientation:forward strand
Alignment:----TGCGACCCTC--
ACTATGCCAACCTACC

PB0025.1_Glis2_1/Jaspar

Match Rank:3
Score:0.60
Offset:-1
Orientation:forward strand
Alignment:-TGCGACCCTC-----
TATCGACCCCCCACAG

PB0059.1_Six6_1/Jaspar

Match Rank:4
Score:0.55
Offset:-5
Orientation:reverse strand
Alignment:-----TGCGACCCTC--
ANANNTGATACCCNATN

PH0166.1_Six6_2/Jaspar

Match Rank:5
Score:0.54
Offset:-5
Orientation:reverse strand
Alignment:-----TGCGACCCTC--
AATNTTGATACCCTATN

PH0163.1_Six3/Jaspar

Match Rank:6
Score:0.54
Offset:-5
Orientation:reverse strand
Alignment:-----TGCGACCCTC--
ANANGTGATACCCTATN

PB0201.1_Zfp281_2/Jaspar

Match Rank:7
Score:0.54
Offset:-1
Orientation:forward strand
Alignment:-TGCGACCCTC------
AGGAGACCCCCAATTTG

MF0004.1_Nuclear_Receptor_class/Jaspar

Match Rank:8
Score:0.53
Offset:2
Orientation:reverse strand
Alignment:TGCGACCCTC
--TGACCT--

PH0165.1_Six6_1/Jaspar

Match Rank:9
Score:0.53
Offset:-5
Orientation:reverse strand
Alignment:-----TGCGACCCTC--
ANANNTGATACCCTATN

PH0162.1_Six2/Jaspar

Match Rank:10
Score:0.53
Offset:-5
Orientation:reverse strand
Alignment:-----TGCGACCCTC--
ANANGTGATACCCCATT