Information for motif21


Reverse Opposite:

p-value:1e-56
log p-value:-1.305e+02
Information Content per bp:1.975
Number of Target Sequences with motif78.0
Percentage of Target Sequences with motif0.29%
Number of Background Sequences with motif6.2
Percentage of Background Sequences with motif0.02%
Average Position of motif in Targets101.2 +/- 55.0bp
Average Position of motif in Background148.5 +/- 24.7bp
Strand Bias (log2 ratio + to - strand density)0.4
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0039.1_Klf7_1/Jaspar

Match Rank:1
Score:0.64
Offset:-4
Orientation:reverse strand
Alignment:----GGGCTGGGTTGC
NNAGGGGCGGGGTNNA

POL003.1_GC-box/Jaspar

Match Rank:2
Score:0.64
Offset:-3
Orientation:forward strand
Alignment:---GGGCTGGGTTGC
AGGGGGCGGGGCTG-

PB0107.1_Ascl2_2/Jaspar

Match Rank:3
Score:0.63
Offset:-4
Orientation:reverse strand
Alignment:----GGGCTGGGTTGC
NATNGGGNGGGGANAN

MA0133.1_BRCA1/Jaspar

Match Rank:4
Score:0.60
Offset:5
Orientation:reverse strand
Alignment:GGGCTGGGTTGC
-----GTGTTGN

Maz(Zf)/HepG2-Maz-ChIP-Seq(GSE31477)/Homer

Match Rank:5
Score:0.58
Offset:0
Orientation:forward strand
Alignment:GGGCTGGGTTGC
GGGGGGGG----

MA0599.1_KLF5/Jaspar

Match Rank:6
Score:0.56
Offset:-1
Orientation:reverse strand
Alignment:-GGGCTGGGTTGC
GGGGNGGGGC---

MA0039.2_Klf4/Jaspar

Match Rank:7
Score:0.56
Offset:-1
Orientation:forward strand
Alignment:-GGGCTGGGTTGC
TGGGTGGGGC---

Sp1(Zf)/Promoter/Homer

Match Rank:8
Score:0.55
Offset:-2
Orientation:reverse strand
Alignment:--GGGCTGGGTTGC
GGGGGCGGGGCC--

MA0079.3_SP1/Jaspar

Match Rank:9
Score:0.55
Offset:-2
Orientation:reverse strand
Alignment:--GGGCTGGGTTGC
GGGGGCGGGGC---

MA0073.1_RREB1/Jaspar

Match Rank:10
Score:0.55
Offset:-6
Orientation:reverse strand
Alignment:------GGGCTGGGTTGC--
NGGGGGGGGGTGGTTTGGGG