Information for motif26


Reverse Opposite:

p-value:1e-7
log p-value:-1.726e+01
Information Content per bp:1.530
Number of Target Sequences with motif83.0
Percentage of Target Sequences with motif0.87%
Number of Background Sequences with motif180.8
Percentage of Background Sequences with motif0.45%
Average Position of motif in Targets97.6 +/- 55.5bp
Average Position of motif in Background96.6 +/- 56.8bp
Strand Bias (log2 ratio + to - strand density)-0.7
Multiplicity (# of sites on avg that occur together)1.14
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

Rbpj1(?)/Panc1-Rbpj1-ChIP-Seq(GSE47459)/Homer

Match Rank:1
Score:0.71
Offset:0
Orientation:reverse strand
Alignment:CCTGGTAA--
CSTGGGAAAD

Rfx5(HTH)/GM12878-Rfx5-ChIP-Seq(GSE31477)/Homer

Match Rank:2
Score:0.70
Offset:-1
Orientation:forward strand
Alignment:-CCTGGTAA---
SCCTAGCAACAG

MA0510.1_RFX5/Jaspar

Match Rank:3
Score:0.68
Offset:-3
Orientation:forward strand
Alignment:---CCTGGTAA----
CTCCCTGGCAACAGC

PH0048.1_Hoxa13/Jaspar

Match Rank:4
Score:0.67
Offset:-3
Orientation:forward strand
Alignment:---CCTGGTAA-----
AAACCTCGTAAAATTT

SD0001.1_at_AC_acceptor/Jaspar

Match Rank:5
Score:0.66
Offset:1
Orientation:forward strand
Alignment:CCTGGTAA----
-CAGGTAAGTAT

Bcl6(Zf)/Liver-Bcl6-ChIP-Seq(GSE31578)/Homer

Match Rank:6
Score:0.65
Offset:-3
Orientation:reverse strand
Alignment:---CCTGGTAA----
TTTCCTGGAAAGNNN

PB0022.1_Gata5_1/Jaspar

Match Rank:7
Score:0.63
Offset:-3
Orientation:forward strand
Alignment:---CCTGGTAA------
TAAACTGATAAGAAGAT

PB0159.1_Rfx4_2/Jaspar

Match Rank:8
Score:0.62
Offset:-3
Orientation:forward strand
Alignment:---CCTGGTAA----
TACCCTAGTTACCGA

PH0068.1_Hoxc13/Jaspar

Match Rank:9
Score:0.62
Offset:-3
Orientation:forward strand
Alignment:---CCTGGTAA-----
AAAGCTCGTAAAATTT

SPDEF(ETS)/VCaP-SPDEF-ChIP-Seq(SRA014231)/Homer

Match Rank:10
Score:0.62
Offset:-4
Orientation:forward strand
Alignment:----CCTGGTAA
ACATCCTGNT--