Homer de novo Motif Results (Motifs.Common/)

Known Motif Enrichment Results
Gene Ontology Enrichment Results
If Homer is having trouble matching a motif to a known motif, try copy/pasting the matrix file into STAMP
More information on motif finding results: HOMER | Description of Results | Tips
Total target sequences = 27272
Total background sequences = 27025
* - possible false positive
RankMotifP-valuelog P-pvalue% of Targets% of Background STD(Bg STD) Best Match/DetailsMotif File
1 1e-531-1.223e+0316.39%7.42%55.4bp (61.4bp)FOXP1(Forkhead)/H9-FOXP1-ChIP-Seq(GSE31006)/Homer(0.949)
More Information | Similar Motifs Found
motif file (matrix)
2 1e-422-9.728e+0233.05%21.51%54.3bp (57.5bp)MA0079.3_SP1/Jaspar(0.974)
More Information | Similar Motifs Found
motif file (matrix)
3 1e-383-8.824e+0211.00%4.74%54.0bp (59.0bp)NFY(CCAAT)/Promoter/Homer(0.966)
More Information | Similar Motifs Found
motif file (matrix)
4 1e-153-3.537e+0219.91%14.06%56.1bp (61.8bp)Elk4(ETS)/Hela-Elk4-ChIP-Seq(GSE31477)/Homer(0.816)
More Information | Similar Motifs Found
motif file (matrix)
5 1e-112-2.589e+027.35%4.31%54.9bp (61.4bp)Lhx2(Homeobox)/HFSC-Lhx2-ChIP-Seq(GSE48068)/Homer(0.891)
More Information | Similar Motifs Found
motif file (matrix)
6 1e-103-2.373e+020.47%0.03%51.0bp (55.0bp)Pbx3(Homeobox)/GM12878-PBX3-ChIP-Seq(GSE32465)/Homer(0.790)
More Information | Similar Motifs Found
motif file (matrix)
7 1e-99-2.283e+0219.08%14.39%56.2bp (60.1bp)GATA3(Zf)/iTreg-Gata3-ChIP-Seq(GSE20898)/Homer(0.889)
More Information | Similar Motifs Found
motif file (matrix)
8 1e-98-2.258e+0211.06%7.49%56.3bp (59.0bp)PB0049.1_Nr2f2_1/Jaspar(0.703)
More Information | Similar Motifs Found
motif file (matrix)
9 1e-87-2.015e+020.23%0.01%59.2bp (14.6bp)Pitx1(Homeobox)/Chicken-Pitx1-ChIP-Seq(GSE38910)/Homer(0.612)
More Information | Similar Motifs Found
motif file (matrix)
10 1e-83-1.932e+020.22%0.00%52.7bp (0.0bp)AP-2gamma(AP2)/MCF7-TFAP2C-ChIP-Seq(GSE21234)/Homer(0.607)
More Information | Similar Motifs Found
motif file (matrix)
11 1e-83-1.931e+023.19%1.54%53.8bp (54.2bp)CRE(bZIP)/Promoter/Homer(0.943)
More Information | Similar Motifs Found
motif file (matrix)
12 1e-83-1.920e+0244.68%38.91%56.2bp (59.8bp)Rbpj1(?)/Panc1-Rbpj1-ChIP-Seq(GSE47459)/Homer(0.765)
More Information | Similar Motifs Found
motif file (matrix)
13 1e-82-1.906e+024.14%2.21%55.2bp (57.5bp)GFY(?)/Promoter/Homer(0.873)
More Information | Similar Motifs Found
motif file (matrix)
14 1e-73-1.686e+023.69%1.98%56.2bp (57.4bp)NRF1/Promoter/Homer(0.924)
More Information | Similar Motifs Found
motif file (matrix)
15 1e-71-1.649e+020.20%0.00%48.2bp (0.0bp)MA0484.1_HNF4G/Jaspar(0.687)
More Information | Similar Motifs Found
motif file (matrix)
16 1e-64-1.485e+020.22%0.01%56.1bp (23.4bp)MA0076.2_ELK4/Jaspar(0.795)
More Information | Similar Motifs Found
motif file (matrix)
17 1e-63-1.451e+020.22%0.01%63.9bp (72.5bp)MA0514.1_Sox3/Jaspar(0.711)
More Information | Similar Motifs Found
motif file (matrix)
18 1e-58-1.343e+020.23%0.01%55.0bp (30.9bp)PH0111.1_Nkx2-2/Jaspar(0.630)
More Information | Similar Motifs Found
motif file (matrix)
19 1e-58-1.336e+020.17%0.00%69.5bp (0.0bp)MA0038.1_Gfi1/Jaspar(0.651)
More Information | Similar Motifs Found
motif file (matrix)
20 1e-57-1.317e+020.20%0.01%51.0bp (58.8bp)PB0010.1_Egr1_1/Jaspar(0.641)
More Information | Similar Motifs Found
motif file (matrix)
21 1e-56-1.305e+020.29%0.02%55.0bp (24.7bp)PB0039.1_Klf7_1/Jaspar(0.643)
More Information | Similar Motifs Found
motif file (matrix)
22 1e-54-1.252e+020.22%0.01%57.8bp (27.6bp)MA0092.1_Hand1::Tcfe2a/Jaspar(0.587)
More Information | Similar Motifs Found
motif file (matrix)
23 1e-50-1.154e+020.26%0.02%53.7bp (31.2bp)Znf263(Zf)/K562-Znf263-ChIP-Seq(GSE31477)/Homer(0.657)
More Information | Similar Motifs Found
motif file (matrix)
24 1e-47-1.090e+020.18%0.01%49.5bp (27.4bp)PB0033.1_Irf3_1/Jaspar(0.691)
More Information | Similar Motifs Found
motif file (matrix)
25 1e-42-9.817e+010.30%0.04%53.7bp (54.4bp)PB0094.1_Zfp128_1/Jaspar(0.753)
More Information | Similar Motifs Found
motif file (matrix)
26 1e-40-9.334e+010.16%0.01%47.2bp (31.1bp)Tcf3(HMG)/mES-Tcf3-ChIP-Seq(GSE11724)/Homer(0.605)
More Information | Similar Motifs Found
motif file (matrix)
27 1e-38-8.913e+0116.84%14.02%55.3bp (55.9bp)Unknown-ESC-element/mES-Nanog-ChIP-Seq(GSE11724)/Homer(0.818)
More Information | Similar Motifs Found
motif file (matrix)
28 1e-36-8.331e+011.59%0.81%55.7bp (63.8bp)MA0527.1_ZBTB33/Jaspar(0.900)
More Information | Similar Motifs Found
motif file (matrix)
29 1e-29-6.862e+010.10%0.00%56.2bp (0.0bp)EWS:FLI1-fusion(ETS)/SK_N_MC-EWS:FLI1-ChIP-Seq(SRA014231)/Homer(0.631)
More Information | Similar Motifs Found
motif file (matrix)
30 1e-26-6.078e+010.15%0.02%59.0bp (27.1bp)MA0103.2_ZEB1/Jaspar(0.686)
More Information | Similar Motifs Found
motif file (matrix)
31 1e-25-5.876e+010.09%0.01%49.9bp (29.2bp)PB0135.1_Hoxa3_2/Jaspar(0.631)
More Information | Similar Motifs Found
motif file (matrix)
32 1e-12-2.991e+010.14%0.03%60.3bp (35.3bp)PB0108.1_Atf1_2/Jaspar(0.783)
More Information | Similar Motifs Found
motif file (matrix)
33 *1e-8-2.041e+010.82%0.54%51.3bp (58.2bp)MA0057.1_MZF1_5-13/Jaspar(0.803)
More Information | Similar Motifs Found
motif file (matrix)