Information for motif42


Reverse Opposite:

p-value:1e-2
log p-value:-5.380e+00
Information Content per bp:1.530
Number of Target Sequences with motif9.0
Percentage of Target Sequences with motif0.09%
Number of Background Sequences with motif13.3
Percentage of Background Sequences with motif0.03%
Average Position of motif in Targets87.5 +/- 63.5bp
Average Position of motif in Background92.7 +/- 45.4bp
Strand Bias (log2 ratio + to - strand density)1.0
Multiplicity (# of sites on avg that occur together)1.67
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

YY1(Zf)/Promoter/Homer

Match Rank:1
Score:0.58
Offset:-2
Orientation:forward strand
Alignment:--ATATGCCG--
CAAGATGGCGGC

PB0143.1_Klf7_2/Jaspar

Match Rank:2
Score:0.57
Offset:-4
Orientation:forward strand
Alignment:----ATATGCCG-----
AAGCATACGCCCAACTT

Olig2(bHLH)/Neuron-Olig2-ChIP-Seq(GSE30882)/Homer

Match Rank:3
Score:0.57
Offset:-3
Orientation:forward strand
Alignment:---ATATGCCG
RCCATMTGTT-

MA0033.1_FOXL1/Jaspar

Match Rank:4
Score:0.56
Offset:1
Orientation:reverse strand
Alignment:ATATGCCG-
-TATGTNTA

PB0108.1_Atf1_2/Jaspar

Match Rank:5
Score:0.56
Offset:0
Orientation:forward strand
Alignment:ATATGCCG------
GAATGACGAATAAC

PB0024.1_Gcm1_1/Jaspar

Match Rank:6
Score:0.56
Offset:-2
Orientation:reverse strand
Alignment:--ATATGCCG------
NNNNATGCGGGTNNNN

MA0496.1_MAFK/Jaspar

Match Rank:7
Score:0.56
Offset:-1
Orientation:reverse strand
Alignment:-ATATGCCG------
AAANTGCTGACTNAG

PB0075.1_Sp100_1/Jaspar

Match Rank:8
Score:0.56
Offset:0
Orientation:reverse strand
Alignment:ATATGCCG------
ATTTTCCGNNAAAT

MafF(bZIP)/HepG2-MafF-ChIP-Seq(GSE31477)/Homer

Match Rank:9
Score:0.56
Offset:-2
Orientation:reverse strand
Alignment:--ATATGCCG-----
AAAWWTGCTGACWWD

TEAD4(TEA)/Tropoblast-Tead4-ChIP-Seq(GSE37350)/Homer

Match Rank:10
Score:0.55
Offset:0
Orientation:reverse strand
Alignment:ATATGCCG--
RCATTCCWGG