Information for motif22


Reverse Opposite:

p-value:1e-54
log p-value:-1.252e+02
Information Content per bp:1.864
Number of Target Sequences with motif60.0
Percentage of Target Sequences with motif0.22%
Number of Background Sequences with motif3.5
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets104.9 +/- 57.8bp
Average Position of motif in Background44.0 +/- 27.6bp
Strand Bias (log2 ratio + to - strand density)-0.5
Multiplicity (# of sites on avg that occur together)1.10
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

MA0092.1_Hand1::Tcfe2a/Jaspar

Match Rank:1
Score:0.59
Offset:2
Orientation:reverse strand
Alignment:TGGATCCAGAGG
--ATGCCAGACN

PB0060.1_Smad3_1/Jaspar

Match Rank:2
Score:0.56
Offset:0
Orientation:forward strand
Alignment:TGGATCCAGAGG-----
CAAATCCAGACATCACA

MA0479.1_FOXH1/Jaspar

Match Rank:3
Score:0.55
Offset:-1
Orientation:forward strand
Alignment:-TGGATCCAGAGG
TCCAATCCACA--

Smad4(MAD)/ESC-SMAD4-ChIP-Seq(GSE29422)/Homer

Match Rank:4
Score:0.55
Offset:5
Orientation:reverse strand
Alignment:TGGATCCAGAGG---
-----CCAGACRSVB

MA0002.2_RUNX1/Jaspar

Match Rank:5
Score:0.54
Offset:2
Orientation:reverse strand
Alignment:TGGATCCAGAGG-
--AAACCACAGAN

PB0193.1_Tcfe2a_2/Jaspar

Match Rank:6
Score:0.54
Offset:1
Orientation:forward strand
Alignment:TGGATCCAGAGG------
-AAGGCCAGATGGTCCGG

PB0139.1_Irf5_2/Jaspar

Match Rank:7
Score:0.53
Offset:0
Orientation:forward strand
Alignment:TGGATCCAGAGG---
TTGACCGAGAATTCC

RUNX-AML(Runt)/CD4+-PolII-ChIP-Seq(Barski et al.)/Homer

Match Rank:8
Score:0.53
Offset:2
Orientation:reverse strand
Alignment:TGGATCCAGAGG
--AAACCACAGC

RUNX(Runt)/HPC7-Runx1-ChIP-Seq(GSE22178)/Homer

Match Rank:9
Score:0.53
Offset:1
Orientation:forward strand
Alignment:TGGATCCAGAGG
-NAAACCACAG-

PB0077.1_Spdef_1/Jaspar

Match Rank:10
Score:0.52
Offset:-1
Orientation:reverse strand
Alignment:-TGGATCCAGAGG---
AANNATCCGGATGTNN