Information for motif35


Reverse Opposite:

p-value:1e-6
log p-value:-1.570e+01
Information Content per bp:1.530
Number of Target Sequences with motif12.0
Percentage of Target Sequences with motif0.08%
Number of Background Sequences with motif4.3
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets118.3 +/- 42.8bp
Average Position of motif in Background76.8 +/- 36.8bp
Strand Bias (log2 ratio + to - strand density)-2.4
Multiplicity (# of sites on avg that occur together)2.82
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0091.1_Zbtb3_1/Jaspar

Match Rank:1
Score:0.68
Offset:-2
Orientation:reverse strand
Alignment:--TACTCCAGTG-----
NNNANTGCAGTGCNNTT

PH0111.1_Nkx2-2/Jaspar

Match Rank:2
Score:0.62
Offset:-2
Orientation:reverse strand
Alignment:--TACTCCAGTG-----
NANTTTCAAGTGGTTAN

Nkx2.1(Homeobox)/LungAC-Nkx2.1-ChIP-Seq(GSE43252)/Homer

Match Rank:3
Score:0.61
Offset:2
Orientation:reverse strand
Alignment:TACTCCAGTG--
--CTYRAGTGSY

PB0195.1_Zbtb3_2/Jaspar

Match Rank:4
Score:0.60
Offset:-2
Orientation:reverse strand
Alignment:--TACTCCAGTG----
NNNNTGCCAGTGATTG

Znf263(Zf)/K562-Znf263-ChIP-Seq(GSE31477)/Homer

Match Rank:5
Score:0.58
Offset:-3
Orientation:forward strand
Alignment:---TACTCCAGTG
CNGTCCTCCC---

PB0185.1_Tcf1_2/Jaspar

Match Rank:6
Score:0.57
Offset:-2
Orientation:reverse strand
Alignment:--TACTCCAGTG--
NNTAATCCNGNCNN

MA0154.2_EBF1/Jaspar

Match Rank:7
Score:0.57
Offset:0
Orientation:forward strand
Alignment:TACTCCAGTG-
GTCCCCAGGGA

MA0032.1_FOXC1/Jaspar

Match Rank:8
Score:0.56
Offset:0
Orientation:reverse strand
Alignment:TACTCCAGTG
TACTNNNN--

CRX(Homeobox)/Retina-Crx-ChIP-Seq(GSE20012)/Homer

Match Rank:9
Score:0.56
Offset:-2
Orientation:forward strand
Alignment:--TACTCCAGTG
GCTAATCC----

PH0171.1_Nkx2-1/Jaspar

Match Rank:10
Score:0.56
Offset:-1
Orientation:reverse strand
Alignment:-TACTCCAGTG-----
AANTTCAAGTGGCTTN