Information for motif26


Reverse Opposite:

p-value:1e-40
log p-value:-9.334e+01
Information Content per bp:1.765
Number of Target Sequences with motif43.0
Percentage of Target Sequences with motif0.16%
Number of Background Sequences with motif2.9
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets95.1 +/- 47.2bp
Average Position of motif in Background120.3 +/- 31.1bp
Strand Bias (log2 ratio + to - strand density)-1.9
Multiplicity (# of sites on avg that occur together)1.91
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

Tcf3(HMG)/mES-Tcf3-ChIP-Seq(GSE11724)/Homer

Match Rank:1
Score:0.61
Offset:-1
Orientation:reverse strand
Alignment:-CTGTGAGCTGGT
CCTTTGATGT---

Tcf4(HMG)/Hct116-Tcf4-ChIP-Seq(SRA012054)/Homer

Match Rank:2
Score:0.60
Offset:-3
Orientation:reverse strand
Alignment:---CTGTGAGCTGGT
TNCCTTTGATGT---

TCFL2(HMG)/K562-TCF7L2-ChIP-Seq(GSE29196)/Homer

Match Rank:3
Score:0.59
Offset:-1
Orientation:reverse strand
Alignment:-CTGTGAGCTGGT
CCTTTGAWGT---

PH0170.1_Tgif2/Jaspar

Match Rank:4
Score:0.57
Offset:-3
Orientation:reverse strand
Alignment:---CTGTGAGCTGGT-
GTATTGACAGCTNNTT

MA0523.1_TCF7L2/Jaspar

Match Rank:5
Score:0.57
Offset:-3
Orientation:reverse strand
Alignment:---CTGTGAGCTGGT
TNCCTTTGATCTTN-

Ap4(HLH)/AML-Tfap4-ChIP-Seq(GSE45738)/Homer

Match Rank:6
Score:0.57
Offset:3
Orientation:reverse strand
Alignment:CTGTGAGCTGGT-
---HCAGCTGDTN

PB0040.1_Lef1_1/Jaspar

Match Rank:7
Score:0.56
Offset:-5
Orientation:forward strand
Alignment:-----CTGTGAGCTGGT
AATCCCTTTGATCTATC

POL009.1_DCE_S_II/Jaspar

Match Rank:8
Score:0.56
Offset:-1
Orientation:forward strand
Alignment:-CTGTGAGCTGGT
GCTGTG-------

PB0084.1_Tcf7l2_1/Jaspar

Match Rank:9
Score:0.55
Offset:-5
Orientation:forward strand
Alignment:-----CTGTGAGCTGGT
ATTTCCTTTGATCTATA

MA0461.1_Atoh1/Jaspar

Match Rank:10
Score:0.55
Offset:4
Orientation:forward strand
Alignment:CTGTGAGCTGGT
----CAGATGGC