Information for motif15


Reverse Opposite:

p-value:1e-22
log p-value:-5.190e+01
Information Content per bp:1.962
Number of Target Sequences with motif40.0
Percentage of Target Sequences with motif0.28%
Number of Background Sequences with motif12.9
Percentage of Background Sequences with motif0.04%
Average Position of motif in Targets80.7 +/- 44.6bp
Average Position of motif in Background106.2 +/- 51.0bp
Strand Bias (log2 ratio + to - strand density)-0.9
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0126.1_Gata5_2/Jaspar

Match Rank:1
Score:0.71
Offset:-2
Orientation:reverse strand
Alignment:--GTTGAAATCT-----
NNNCTGATATCTCNNNN

PH0037.1_Hdx/Jaspar

Match Rank:2
Score:0.68
Offset:-2
Orientation:forward strand
Alignment:--GTTGAAATCT-----
AAGGCGAAATCATCGCA

GATA-IR3(Zf)/iTreg-Gata3-ChIP-Seq(GSE20898)/Homer

Match Rank:3
Score:0.64
Offset:-4
Orientation:reverse strand
Alignment:----GTTGAAATCT------
NDBAGATRWTATCTVNNNNN

PB0125.1_Gata3_2/Jaspar

Match Rank:4
Score:0.63
Offset:-6
Orientation:reverse strand
Alignment:------GTTGAAATCT------
NNNNNCGATANNATCTNNNNAN

Tbx20(T-box)/Heart-Tbx20-ChIP-Seq(GSE29636)/Homer

Match Rank:5
Score:0.62
Offset:-3
Orientation:forward strand
Alignment:---GTTGAAATCT
GGTGYTGACAGS-

CHR/Cell-Cycle-Exp/Homer

Match Rank:6
Score:0.61
Offset:0
Orientation:reverse strand
Alignment:GTTGAAATCT
TTTGAAACCG

PH0170.1_Tgif2/Jaspar

Match Rank:7
Score:0.59
Offset:-2
Orientation:reverse strand
Alignment:--GTTGAAATCT----
GTATTGACAGCTNNTT

MA0038.1_Gfi1/Jaspar

Match Rank:8
Score:0.58
Offset:3
Orientation:forward strand
Alignment:GTTGAAATCT---
---CAAATCACTG

CEBP:AP1(bZIP)/ThioMac-CEBPb-ChIP-Seq(GSE21512)/Homer

Match Rank:9
Score:0.57
Offset:-3
Orientation:forward strand
Alignment:---GTTGAAATCT
NATGTTGCAA---

MA0133.1_BRCA1/Jaspar

Match Rank:10
Score:0.57
Offset:-2
Orientation:reverse strand
Alignment:--GTTGAAATCT
GTGTTGN-----