Information for motif7


Reverse Opposite:

p-value:1e-28
log p-value:-6.529e+01
Information Content per bp:1.896
Number of Target Sequences with motif22.0
Percentage of Target Sequences with motif0.23%
Number of Background Sequences with motif2.9
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets68.1 +/- 38.4bp
Average Position of motif in Background78.2 +/- 56.3bp
Strand Bias (log2 ratio + to - strand density)0.3
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0196.1_Zbtb7b_2/Jaspar

Match Rank:1
Score:0.62
Offset:-4
Orientation:reverse strand
Alignment:----CGGTGGCCTCTT-
NNANTGGTGGTCTTNNN

Nkx2.5(Homeobox)/HL1-Nkx2.5.biotin-ChIP-Seq(GSE21529)/Homer

Match Rank:2
Score:0.59
Offset:4
Orientation:forward strand
Alignment:CGGTGGCCTCTT--
----AASCACTCAA

MA0160.1_NR4A2/Jaspar

Match Rank:3
Score:0.59
Offset:2
Orientation:reverse strand
Alignment:CGGTGGCCTCTT
--GTGACCTT--

PB0053.1_Rara_1/Jaspar

Match Rank:4
Score:0.57
Offset:-1
Orientation:reverse strand
Alignment:-CGGTGGCCTCTT---
NNNGTGACCTTTGNNN

Nkx2.1(Homeobox)/LungAC-Nkx2.1-ChIP-Seq(GSE43252)/Homer

Match Rank:5
Score:0.56
Offset:5
Orientation:forward strand
Alignment:CGGTGGCCTCTT---
-----RSCACTYRAG

PB0118.1_Esrra_2/Jaspar

Match Rank:6
Score:0.55
Offset:-2
Orientation:reverse strand
Alignment:--CGGTGGCCTCTT---
NNNNTTGACCCCTNNNN

PB0134.1_Hnf4a_2/Jaspar

Match Rank:7
Score:0.55
Offset:-1
Orientation:reverse strand
Alignment:-CGGTGGCCTCTT---
NNATTGGACTTTNGNN

MA0512.1_Rxra/Jaspar

Match Rank:8
Score:0.54
Offset:1
Orientation:reverse strand
Alignment:CGGTGGCCTCTT
-NCTGACCTTTG

MA0130.1_ZNF354C/Jaspar

Match Rank:9
Score:0.54
Offset:2
Orientation:reverse strand
Alignment:CGGTGGCCTCTT
--GTGGAT----

MA0146.2_Zfx/Jaspar

Match Rank:10
Score:0.53
Offset:-4
Orientation:forward strand
Alignment:----CGGTGGCCTCTT
GGGGCCGAGGCCTG--