Information for motif20


Reverse Opposite:

p-value:1e-57
log p-value:-1.317e+02
Information Content per bp:1.904
Number of Target Sequences with motif55.0
Percentage of Target Sequences with motif0.20%
Number of Background Sequences with motif2.9
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets87.0 +/- 51.0bp
Average Position of motif in Background126.2 +/- 58.8bp
Strand Bias (log2 ratio + to - strand density)-0.2
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0010.1_Egr1_1/Jaspar

Match Rank:1
Score:0.64
Offset:-1
Orientation:forward strand
Alignment:-CCGMACCCGCTG-
TCCGCCCCCGCATT

Tcf12(HLH)/GM12878-Tcf12-ChIP-Seq(GSE32465)/Homer

Match Rank:2
Score:0.62
Offset:3
Orientation:reverse strand
Alignment:CCGMACCCGCTG-
---CAGCAGCTGN

MA0162.2_EGR1/Jaspar

Match Rank:3
Score:0.62
Offset:-3
Orientation:forward strand
Alignment:---CCGMACCCGCTG
CCCCCGCCCCCGCC-

MA0461.1_Atoh1/Jaspar

Match Rank:4
Score:0.62
Offset:4
Orientation:reverse strand
Alignment:CCGMACCCGCTG
----GCCATCTG

EKLF(Zf)/Erythrocyte-Klf1-ChIP-Seq(GSE20478)/Homer

Match Rank:5
Score:0.61
Offset:-2
Orientation:reverse strand
Alignment:--CCGMACCCGCTG
GGCCACACCCAN--

Ap4(HLH)/AML-Tfap4-ChIP-Seq(GSE45738)/Homer

Match Rank:6
Score:0.60
Offset:3
Orientation:forward strand
Alignment:CCGMACCCGCTG-
---NAHCAGCTGD

Klf4(Zf)/mES-Klf4-ChIP-Seq(GSE11431)/Homer

Match Rank:7
Score:0.60
Offset:-1
Orientation:forward strand
Alignment:-CCGMACCCGCTG
GCCACACCCA---

MA0493.1_Klf1/Jaspar

Match Rank:8
Score:0.60
Offset:-2
Orientation:forward strand
Alignment:--CCGMACCCGCTG
GGCCACACCCA---

PB0206.1_Zic2_2/Jaspar

Match Rank:9
Score:0.59
Offset:2
Orientation:reverse strand
Alignment:CCGMACCCGCTG-----
--TCNCCTGCTGNGNNN

MyoD(HLH)/Myotube-MyoD-ChIP-Seq(GSE21614)/Homer

Match Rank:10
Score:0.59
Offset:2
Orientation:reverse strand
Alignment:CCGMACCCGCTG--
--NNAGCAGCTGCT