p-value: | 1e-17 |
log p-value: | -3.963e+01 |
Information Content per bp: | 1.530 |
Number of Target Sequences with motif | 20.0 |
Percentage of Target Sequences with motif | 0.14% |
Number of Background Sequences with motif | 3.5 |
Percentage of Background Sequences with motif | 0.01% |
Average Position of motif in Targets | 66.1 +/- 46.3bp |
Average Position of motif in Background | 122.1 +/- 63.5bp |
Strand Bias (log2 ratio + to - strand density) | -1.2 |
Multiplicity (# of sites on avg that occur together) | 1.00 |
Motif File: | file (matrix) reverse opposite |
PDF Format Logos: | forward logo reverse opposite |
Pitx1(Homeobox)/Chicken-Pitx1-ChIP-Seq(GSE38910)/Homer
Match Rank: | 1 |
Score: | 0.66 |
Offset: | 1 |
Orientation: | reverse strand |
Alignment: | AAGGCATTAC -NGGGATTA- |
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PH0138.1_Pitx2/Jaspar
Match Rank: | 2 |
Score: | 0.60 |
Offset: | -2 |
Orientation: | forward strand |
Alignment: | --AAGGCATTAC----- TGAAGGGATTAATCATC |
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PH0035.1_Gsc/Jaspar
Match Rank: | 3 |
Score: | 0.60 |
Offset: | -2 |
Orientation: | reverse strand |
Alignment: | --AAGGCATTAC----- NNAAGGGATTAACGANT |
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Nkx6.1(Homeobox)/Islet-Nkx6.1-ChIP-Seq(GSE40975)/Homer
Match Rank: | 4 |
Score: | 0.60 |
Offset: | 3 |
Orientation: | reverse strand |
Alignment: | AAGGCATTAC- ---YCATTAMC |
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PH0137.1_Pitx1/Jaspar
Match Rank: | 5 |
Score: | 0.60 |
Offset: | -3 |
Orientation: | forward strand |
Alignment: | ---AAGGCATTAC---- TTAGAGGGATTAACAAT |
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PH0130.1_Otx2/Jaspar
Match Rank: | 6 |
Score: | 0.60 |
Offset: | -2 |
Orientation: | forward strand |
Alignment: | --AAGGCATTAC----- TGTAGGGATTAATTGTC |
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PH0129.1_Otx1/Jaspar
Match Rank: | 7 |
Score: | 0.60 |
Offset: | -2 |
Orientation: | forward strand |
Alignment: | --AAGGCATTAC----- AGAGGGGATTAATTTAT |
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PH0125.1_Obox5_2/Jaspar
Match Rank: | 8 |
Score: | 0.59 |
Offset: | -2 |
Orientation: | reverse strand |
Alignment: | --AAGGCATTAC----- NANAGGGATTAATTATN |
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MA0132.1_Pdx1/Jaspar
Match Rank: | 9 |
Score: | 0.59 |
Offset: | 4 |
Orientation: | reverse strand |
Alignment: | AAGGCATTAC ----AATTAG |
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PH0121.1_Obox1/Jaspar
Match Rank: | 10 |
Score: | 0.59 |
Offset: | -3 |
Orientation: | forward strand |
Alignment: | ---AAGGCATTAC---- TTAAGGGGATTAACTAC |
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