Information for motif27


Reverse Opposite:

p-value:1e-13
log p-value:-3.184e+01
Information Content per bp:1.530
Number of Target Sequences with motif15.0
Percentage of Target Sequences with motif0.10%
Number of Background Sequences with motif2.8
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets96.9 +/- 44.2bp
Average Position of motif in Background41.2 +/- 18.0bp
Strand Bias (log2 ratio + to - strand density)0.0
Multiplicity (# of sites on avg that occur together)1.57
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

Oct2(POU/Homeobox)/Bcell-Oct2-ChIP-Seq(GSE21512)/Homer

Match Rank:1
Score:0.65
Offset:-2
Orientation:reverse strand
Alignment:--TTGCCTATAT
ATTTGCATAT--

SD0002.1_at_AC_acceptor/Jaspar

Match Rank:2
Score:0.64
Offset:-4
Orientation:reverse strand
Alignment:----TTGCCTATAT
NNACTTGCCTT---

MA0507.1_POU2F2/Jaspar

Match Rank:3
Score:0.58
Offset:-5
Orientation:forward strand
Alignment:-----TTGCCTATAT
TTCATTTGCATAT--

MA0033.1_FOXL1/Jaspar

Match Rank:4
Score:0.58
Offset:5
Orientation:reverse strand
Alignment:TTGCCTATAT---
-----TATGTNTA

Oct4(POU/Homeobox)/mES-Oct4-ChIP-Seq(GSE11431)/Homer

Match Rank:5
Score:0.58
Offset:-2
Orientation:forward strand
Alignment:--TTGCCTATAT
ATTTGCATAA--

PB0163.1_Six6_2/Jaspar

Match Rank:6
Score:0.58
Offset:-2
Orientation:reverse strand
Alignment:--TTGCCTATAT-----
ANNNGGATATATCCNNN

PB0148.1_Mtf1_2/Jaspar

Match Rank:7
Score:0.58
Offset:-4
Orientation:reverse strand
Alignment:----TTGCCTATAT
NNTTTTTCTTATNT

MA0597.1_THAP1/Jaspar

Match Rank:8
Score:0.56
Offset:0
Orientation:forward strand
Alignment:TTGCCTATAT
CTGCCCGCA-

MF0006.1_bZIP_cEBP-like_subclass/Jaspar

Match Rank:9
Score:0.56
Offset:-1
Orientation:forward strand
Alignment:-TTGCCTATAT
ATTGCATAA--

PB0019.1_Foxl1_1/Jaspar

Match Rank:10
Score:0.56
Offset:-4
Orientation:reverse strand
Alignment:----TTGCCTATAT---
NNNTTTGTTTACATTTN