Information for motif37


Reverse Opposite:

p-value:1e-5
log p-value:-1.302e+01
Information Content per bp:1.530
Number of Target Sequences with motif8.0
Percentage of Target Sequences with motif0.06%
Number of Background Sequences with motif2.0
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets109.8 +/- 50.1bp
Average Position of motif in Background50.4 +/- 7.8bp
Strand Bias (log2 ratio + to - strand density)2.3
Multiplicity (# of sites on avg that occur together)2.57
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

MA0019.1_Ddit3::Cebpa/Jaspar

Match Rank:1
Score:0.66
Offset:-1
Orientation:reverse strand
Alignment:-GTAGTGCATG-
GGGATTGCATNN

PH0083.1_Irx3_1/Jaspar

Match Rank:2
Score:0.59
Offset:-1
Orientation:reverse strand
Alignment:-GTAGTGCATG------
ANTATTACATGTANNNN

PB0096.1_Zfp187_1/Jaspar

Match Rank:3
Score:0.59
Offset:-3
Orientation:reverse strand
Alignment:---GTAGTGCATG-
TTATTAGTACATAN

Arnt:Ahr(bHLH)/MCF7-Arnt-ChIP-Seq(Lo et al.)/Homer

Match Rank:4
Score:0.57
Offset:3
Orientation:reverse strand
Alignment:GTAGTGCATG---
---TTGCGTGCVA

MA0122.1_Nkx3-2/Jaspar

Match Rank:5
Score:0.56
Offset:-1
Orientation:forward strand
Alignment:-GTAGTGCATG
TTAAGTGGA--

PH0084.1_Irx3_2/Jaspar

Match Rank:6
Score:0.56
Offset:-1
Orientation:reverse strand
Alignment:-GTAGTGCATG------
NNTATTACATGTANNNT

MA0006.1_Arnt::Ahr/Jaspar

Match Rank:7
Score:0.55
Offset:4
Orientation:forward strand
Alignment:GTAGTGCATG
----TGCGTG

NRF1/Promoter/Homer

Match Rank:8
Score:0.55
Offset:3
Orientation:reverse strand
Alignment:GTAGTGCATG-----
---GCGCATGCGCAC

PH0086.1_Irx5/Jaspar

Match Rank:9
Score:0.54
Offset:-1
Orientation:reverse strand
Alignment:-GTAGTGCATG------
ANTNNTACATGTANNTN

PH0085.1_Irx4/Jaspar

Match Rank:10
Score:0.54
Offset:-1
Orientation:reverse strand
Alignment:-GTAGTGCATG------
NNTTTTACATGTANNNT