Information for motif37


Reverse Opposite:

p-value:1e-3
log p-value:-9.112e+00
Information Content per bp:1.979
Number of Target Sequences with motif4.0
Percentage of Target Sequences with motif0.04%
Number of Background Sequences with motif0.8
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets101.3 +/- 60.7bp
Average Position of motif in Background82.0 +/- 0.0bp
Strand Bias (log2 ratio + to - strand density)3.2
Multiplicity (# of sites on avg that occur together)5.00
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0040.1_Lef1_1/Jaspar

Match Rank:1
Score:0.57
Offset:0
Orientation:reverse strand
Alignment:GTTAGATCTGAG-----
NANAGATCAAAGGGNNN

PB0194.1_Zbtb12_2/Jaspar

Match Rank:2
Score:0.56
Offset:-4
Orientation:forward strand
Alignment:----GTTAGATCTGAG
TATCATTAGAACGCT-

PB0084.1_Tcf7l2_1/Jaspar

Match Rank:3
Score:0.54
Offset:0
Orientation:reverse strand
Alignment:GTTAGATCTGAG-----
NNNAGATCAAAGGANNN

Tcf4(HMG)/Hct116-Tcf4-ChIP-Seq(SRA012054)/Homer

Match Rank:4
Score:0.53
Offset:-3
Orientation:reverse strand
Alignment:---GTTAGATCTGAG
TNCCTTTGATGT---

MA0153.1_HNF1B/Jaspar

Match Rank:5
Score:0.52
Offset:0
Orientation:reverse strand
Alignment:GTTAGATCTGAG
GTTAAATATTAA

MA0483.1_Gfi1b/Jaspar

Match Rank:6
Score:0.52
Offset:3
Orientation:forward strand
Alignment:GTTAGATCTGAG--
---AAATCACAGCA

PB0082.1_Tcf3_1/Jaspar

Match Rank:7
Score:0.52
Offset:0
Orientation:forward strand
Alignment:GTTAGATCTGAG-----
TATAGATCAAAGGAAAA

PB0126.1_Gata5_2/Jaspar

Match Rank:8
Score:0.51
Offset:-2
Orientation:forward strand
Alignment:--GTTAGATCTGAG---
GACAGAGATATCAGTGT

PB0083.1_Tcf7_1/Jaspar

Match Rank:9
Score:0.51
Offset:-5
Orientation:reverse strand
Alignment:-----GTTAGATCTGAG
NNTTCCTTTGATCTNNA

MA0009.1_T/Jaspar

Match Rank:10
Score:0.50
Offset:1
Orientation:forward strand
Alignment:GTTAGATCTGAG
-CTAGGTGTGAA