Information for motif27


Reverse Opposite:

p-value:1e-7
log p-value:-1.647e+01
Information Content per bp:1.967
Number of Target Sequences with motif10.0
Percentage of Target Sequences with motif0.10%
Number of Background Sequences with motif4.6
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets106.8 +/- 55.2bp
Average Position of motif in Background109.7 +/- 44.7bp
Strand Bias (log2 ratio + to - strand density)-0.9
Multiplicity (# of sites on avg that occur together)2.00
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

MA0461.1_Atoh1/Jaspar

Match Rank:1
Score:0.60
Offset:1
Orientation:reverse strand
Alignment:CGCCAGCTCACC
-GCCATCTG---

MA0506.1_NRF1/Jaspar

Match Rank:2
Score:0.59
Offset:-1
Orientation:forward strand
Alignment:-CGCCAGCTCACC
GCGCCTGCGCA--

NRF1(NRF)/MCF7-NRF1-ChIP-Seq(Unpublished)/Homer

Match Rank:3
Score:0.56
Offset:-1
Orientation:reverse strand
Alignment:-CGCCAGCTCACC
GCGCATGCGCAG-

PB0153.1_Nr2f2_2/Jaspar

Match Rank:4
Score:0.55
Offset:-2
Orientation:forward strand
Alignment:--CGCCAGCTCACC--
CGCGCCGGGTCACGTA

MA0103.2_ZEB1/Jaspar

Match Rank:5
Score:0.55
Offset:5
Orientation:forward strand
Alignment:CGCCAGCTCACC--
-----CCTCACCTG

SD0001.1_at_AC_acceptor/Jaspar

Match Rank:6
Score:0.55
Offset:3
Orientation:reverse strand
Alignment:CGCCAGCTCACC--
---NNACTTACCTN

PB0010.1_Egr1_1/Jaspar

Match Rank:7
Score:0.55
Offset:-2
Orientation:forward strand
Alignment:--CGCCAGCTCACC
TCCGCCCCCGCATT

MA0117.1_Mafb/Jaspar

Match Rank:8
Score:0.54
Offset:-1
Orientation:reverse strand
Alignment:-CGCCAGCTCACC
NCGTCAGC-----

MA0160.1_NR4A2/Jaspar

Match Rank:9
Score:0.54
Offset:3
Orientation:forward strand
Alignment:CGCCAGCTCACC
---AAGGTCAC-

Atoh1(bHLH)/Cerebellum-Atoh1-ChIP-Seq(GSE22111)/Homer

Match Rank:10
Score:0.53
Offset:1
Orientation:reverse strand
Alignment:CGCCAGCTCACC-
-GCCAGCTGBTNB