Information for motif7


Reverse Opposite:

p-value:1e-38
log p-value:-8.941e+01
Information Content per bp:1.960
Number of Target Sequences with motif27.0
Percentage of Target Sequences with motif0.19%
Number of Background Sequences with motif1.7
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets98.6 +/- 47.4bp
Average Position of motif in Background79.4 +/- 5.9bp
Strand Bias (log2 ratio + to - strand density)0.1
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

POL009.1_DCE_S_II/Jaspar

Match Rank:1
Score:0.60
Offset:7
Orientation:reverse strand
Alignment:ACATTCTCACAG-
-------CACAGN

Rbpj1(?)/Panc1-Rbpj1-ChIP-Seq(GSE47459)/Homer

Match Rank:2
Score:0.57
Offset:1
Orientation:forward strand
Alignment:ACATTCTCACAG
-HTTTCCCASG-

PB0170.1_Sox17_2/Jaspar

Match Rank:3
Score:0.55
Offset:-4
Orientation:forward strand
Alignment:----ACATTCTCACAG-
GACCACATTCATACAAT

MA0078.1_Sox17/Jaspar

Match Rank:4
Score:0.53
Offset:-1
Orientation:forward strand
Alignment:-ACATTCTCACAG
CTCATTGTC----

PH0169.1_Tgif1/Jaspar

Match Rank:5
Score:0.53
Offset:1
Orientation:forward strand
Alignment:ACATTCTCACAG------
-GATATTGACAGCTGCGT

Eomes(T-box)/H9-Eomes-ChIP-Seq(GSE26097)/Homer

Match Rank:6
Score:0.52
Offset:2
Orientation:forward strand
Alignment:ACATTCTCACAG
--ATTAACACCT

PB0151.1_Myf6_2/Jaspar

Match Rank:7
Score:0.52
Offset:-4
Orientation:forward strand
Alignment:----ACATTCTCACAG
AGCAACAGCCGCACC-

PB0013.1_Eomes_1/Jaspar

Match Rank:8
Score:0.51
Offset:1
Orientation:reverse strand
Alignment:ACATTCTCACAG------
-NNTTTTCACACCTTNNN

Tbet(T-box)/CD8-Tbet-ChIP-Seq(GSE33802)/Homer

Match Rank:9
Score:0.51
Offset:2
Orientation:reverse strand
Alignment:ACATTCTCACAG
--KTTCACACCT

MA0498.1_Meis1/Jaspar

Match Rank:10
Score:0.51
Offset:-1
Orientation:reverse strand
Alignment:-ACATTCTCACAG--
NNNTGAGTGACAGCT