p-value: | 1e-25 |
log p-value: | -5.876e+01 |
Information Content per bp: | 1.892 |
Number of Target Sequences with motif | 25.0 |
Percentage of Target Sequences with motif | 0.09% |
Number of Background Sequences with motif | 1.9 |
Percentage of Background Sequences with motif | 0.01% |
Average Position of motif in Targets | 104.8 +/- 49.9bp |
Average Position of motif in Background | 58.3 +/- 29.2bp |
Strand Bias (log2 ratio + to - strand density) | 1.8 |
Multiplicity (# of sites on avg that occur together) | 2.56 |
Motif File: | file (matrix) reverse opposite |
PDF Format Logos: | forward logo reverse opposite |
PB0135.1_Hoxa3_2/Jaspar
Match Rank: | 1 |
Score: | 0.63 |
Offset: | -1 |
Orientation: | reverse strand |
Alignment: | -CTAAATGGGTTG- CCTTAATNGNTTTT |
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PH0006.1_Barhl2/Jaspar
Match Rank: | 2 |
Score: | 0.63 |
Offset: | -2 |
Orientation: | reverse strand |
Alignment: | --CTAAATGGGTTG-- NNNTTAATTGGTTTTT |
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PH0088.1_Isl2/Jaspar
Match Rank: | 3 |
Score: | 0.62 |
Offset: | -2 |
Orientation: | reverse strand |
Alignment: | --CTAAATGGGTTG-- AAATTAATTGATTTNG |
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PB0048.1_Nkx3-1_1/Jaspar
Match Rank: | 4 |
Score: | 0.61 |
Offset: | -4 |
Orientation: | reverse strand |
Alignment: | ----CTAAATGGGTTG- NTNNTTAAGTGGNTNAN |
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PH0089.1_Isx/Jaspar
Match Rank: | 5 |
Score: | 0.61 |
Offset: | -4 |
Orientation: | reverse strand |
Alignment: | ----CTAAATGGGTTG ACNNCTAATTAGNNNN |
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Isl1(Homeobox)/Neuron-Isl1-ChIP-Seq(GSE31456)/Homer
Match Rank: | 6 |
Score: | 0.61 |
Offset: | 0 |
Orientation: | forward strand |
Alignment: | CTAAATGGGTTG CTAATKGV---- |
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Nanog(Homeobox)/mES-Nanog-ChIP-Seq(GSE11724)/Homer
Match Rank: | 7 |
Score: | 0.61 |
Offset: | 0 |
Orientation: | reverse strand |
Alignment: | CTAAATGGGTTG GTTAATGGCC-- |
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PH0005.1_Barhl1/Jaspar
Match Rank: | 8 |
Score: | 0.60 |
Offset: | -3 |
Orientation: | reverse strand |
Alignment: | ---CTAAATGGGTTG- GNNTTAATTGGTTGTT |
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PH0115.1_Nkx2-6/Jaspar
Match Rank: | 9 |
Score: | 0.60 |
Offset: | -4 |
Orientation: | reverse strand |
Alignment: | ----CTAAATGGGTTG AATNTTAAGTGGNTNN |
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PH0004.1_Nkx3-2/Jaspar
Match Rank: | 10 |
Score: | 0.60 |
Offset: | -4 |
Orientation: | reverse strand |
Alignment: | ----CTAAATGGGTTG- NTNNTTAAGTGGTTANN |
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