p-value: | 1e-5 |
log p-value: | -1.236e+01 |
Information Content per bp: | 1.496 |
Number of Target Sequences with motif | 6.0 |
Percentage of Target Sequences with motif | 0.04% |
Number of Background Sequences with motif | 0.7 |
Percentage of Background Sequences with motif | 0.00% |
Average Position of motif in Targets | 84.5 +/- 50.4bp |
Average Position of motif in Background | 139.0 +/- 0.0bp |
Strand Bias (log2 ratio + to - strand density) | -3.0 |
Multiplicity (# of sites on avg that occur together) | 7.50 |
Motif File: | file (matrix) reverse opposite |
PDF Format Logos: | forward logo reverse opposite |
Smad3(MAD)/NPC-Smad3-ChIP-Seq(GSE36673)/Homer
Match Rank: | 1 |
Score: | 0.56 |
Offset: | 5 |
Orientation: | forward strand |
Alignment: | AGHRYATGGCTA- -----TWGTCTGV |
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MA0089.1_NFE2L1::MafG/Jaspar
Match Rank: | 2 |
Score: | 0.55 |
Offset: | 4 |
Orientation: | forward strand |
Alignment: | AGHRYATGGCTA ----CATGAC-- |
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MA0161.1_NFIC/Jaspar
Match Rank: | 3 |
Score: | 0.53 |
Offset: | 5 |
Orientation: | forward strand |
Alignment: | AGHRYATGGCTA -----TTGGCA- |
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POL010.1_DCE_S_III/Jaspar
Match Rank: | 4 |
Score: | 0.52 |
Offset: | 7 |
Orientation: | reverse strand |
Alignment: | AGHRYATGGCTA -------NGCTN |
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PAX3:FKHR-fusion(Paired/Homeobox)/Rh4-PAX3:FKHR-ChIP-Seq(GSE19063)/Homer
Match Rank: | 5 |
Score: | 0.52 |
Offset: | 2 |
Orientation: | forward strand |
Alignment: | AGHRYATGGCTA----- --ACCGTGACTAATTNN |
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Nanog(Homeobox)/mES-Nanog-ChIP-Seq(GSE11724)/Homer
Match Rank: | 6 |
Score: | 0.52 |
Offset: | 1 |
Orientation: | reverse strand |
Alignment: | AGHRYATGGCTA -GTTAATGGCC- |
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POL004.1_CCAAT-box/Jaspar
Match Rank: | 7 |
Score: | 0.51 |
Offset: | 2 |
Orientation: | reverse strand |
Alignment: | AGHRYATGGCTA-- --TGATTGGCTANN |
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NeuroD1(bHLH)/Islet-NeuroD1-ChIP-Seq(GSE30298)/Homer
Match Rank: | 8 |
Score: | 0.51 |
Offset: | 0 |
Orientation: | reverse strand |
Alignment: | AGHRYATGGCTA AACAGATGGC-- |
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MA0067.1_Pax2/Jaspar
Match Rank: | 9 |
Score: | 0.50 |
Offset: | 3 |
Orientation: | reverse strand |
Alignment: | AGHRYATGGCTA ---NCGTGACN- |
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MA0058.2_MAX/Jaspar
Match Rank: | 10 |
Score: | 0.49 |
Offset: | -1 |
Orientation: | forward strand |
Alignment: | -AGHRYATGGCTA AAGCACATGG--- |
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