Information for motif12


Reverse Opposite:

p-value:1e-83
log p-value:-1.920e+02
Information Content per bp:1.594
Number of Target Sequences with motif12184.0
Percentage of Target Sequences with motif44.68%
Number of Background Sequences with motif10515.0
Percentage of Background Sequences with motif38.91%
Average Position of motif in Targets99.5 +/- 56.2bp
Average Position of motif in Background100.6 +/- 59.8bp
Strand Bias (log2 ratio + to - strand density)0.0
Multiplicity (# of sites on avg that occur together)1.32
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

Rbpj1(?)/Panc1-Rbpj1-ChIP-Seq(GSE47459)/Homer

Match Rank:1
Score:0.77
Offset:-1
Orientation:reverse strand
Alignment:-CTGCGAAA-
CSTGGGAAAD

MA0519.1_Stat5a::Stat5b/Jaspar

Match Rank:2
Score:0.65
Offset:-2
Orientation:reverse strand
Alignment:--CTGCGAAA-
TTCTTGGAAAN

MA0144.2_STAT3/Jaspar

Match Rank:3
Score:0.65
Offset:-3
Orientation:forward strand
Alignment:---CTGCGAAA
CTTCTGGGAAA

POL009.1_DCE_S_II/Jaspar

Match Rank:4
Score:0.65
Offset:-1
Orientation:forward strand
Alignment:-CTGCGAAA
GCTGTG---

PB0013.1_Eomes_1/Jaspar

Match Rank:5
Score:0.63
Offset:-6
Orientation:forward strand
Alignment:------CTGCGAAA---
GAAAAGGTGTGAAAATT

E2F(E2F)/Cell-Cycle-Exp/Homer

Match Rank:6
Score:0.62
Offset:-3
Orientation:forward strand
Alignment:---CTGCGAAA-
TTCGCGCGAAAA

PB0138.1_Irf4_2/Jaspar

Match Rank:7
Score:0.61
Offset:-4
Orientation:reverse strand
Alignment:----CTGCGAAA---
GNNACCGAGAATNNN

STAT5(Stat)/mCD4+-Stat5-ChIP-Seq(GSE12346)/Homer

Match Rank:8
Score:0.61
Offset:-3
Orientation:reverse strand
Alignment:---CTGCGAAA-
TTTCTNAGAAAN

ZNF143|STAF(Zf)/CUTLL-ZNF143-ChIP-Seq(GSE29600)/Homer

Match Rank:9
Score:0.60
Offset:-6
Orientation:reverse strand
Alignment:------CTGCGAAA-
RGSMTBCTGGGAAAT

IRF4(IRF)/GM12878-IRF4-ChIP-Seq(GSE32465)/Homer

Match Rank:10
Score:0.60
Offset:1
Orientation:forward strand
Alignment:CTGCGAAA---
-ACTGAAACCA