Information for motif18


Reverse Opposite:

p-value:1e-58
log p-value:-1.343e+02
Information Content per bp:1.729
Number of Target Sequences with motif63.0
Percentage of Target Sequences with motif0.23%
Number of Background Sequences with motif4.0
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets99.0 +/- 55.0bp
Average Position of motif in Background89.4 +/- 30.9bp
Strand Bias (log2 ratio + to - strand density)0.8
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

PH0111.1_Nkx2-2/Jaspar

Match Rank:1
Score:0.63
Offset:-1
Orientation:forward strand
Alignment:-TCACCTCTTGAC----
ATAACCACTTGAAAATT

PB0118.1_Esrra_2/Jaspar

Match Rank:2
Score:0.62
Offset:-5
Orientation:reverse strand
Alignment:-----TCACCTCTTGAC
NNNNTTGACCCCTNNNN

PB0189.1_Tcfap2a_2/Jaspar

Match Rank:3
Score:0.61
Offset:0
Orientation:forward strand
Alignment:TCACCTCTTGAC--
TCACCTCTGGGCAG

MA0512.1_Rxra/Jaspar

Match Rank:4
Score:0.61
Offset:-2
Orientation:reverse strand
Alignment:--TCACCTCTTGAC
NCTGACCTTTG---

PB0053.1_Rara_1/Jaspar

Match Rank:5
Score:0.60
Offset:-4
Orientation:reverse strand
Alignment:----TCACCTCTTGAC
NNNGTGACCTTTGNNN

Tbx5(T-box)/HL1-Tbx5.biotin-ChIP-Seq(GSE21529)/Homer

Match Rank:6
Score:0.59
Offset:-2
Orientation:reverse strand
Alignment:--TCACCTCTTGAC
TGACACCT------

PB0049.1_Nr2f2_1/Jaspar

Match Rank:7
Score:0.59
Offset:-4
Orientation:reverse strand
Alignment:----TCACCTCTTGAC
NNNNTGACCTTTNNNN

PB0089.1_Tcfe2a_1/Jaspar

Match Rank:8
Score:0.59
Offset:-5
Orientation:reverse strand
Alignment:-----TCACCTCTTGAC
NNTNCGCACCTGTNGAN

MA0103.2_ZEB1/Jaspar

Match Rank:9
Score:0.59
Offset:-2
Orientation:forward strand
Alignment:--TCACCTCTTGAC
CCTCACCTG-----

MA0595.1_SREBF1/Jaspar

Match Rank:10
Score:0.58
Offset:-1
Orientation:forward strand
Alignment:-TCACCTCTTGAC
ATCACCCCAC---