Information for motif29


Reverse Opposite:

p-value:1e-29
log p-value:-6.862e+01
Information Content per bp:1.854
Number of Target Sequences with motif28.0
Percentage of Target Sequences with motif0.10%
Number of Background Sequences with motif0.0
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets99.3 +/- 56.2bp
Average Position of motif in Background0.0 +/- 0.0bp
Strand Bias (log2 ratio + to - strand density)-2.2
Multiplicity (# of sites on avg that occur together)2.11
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

EWS:FLI1-fusion(ETS)/SK_N_MC-EWS:FLI1-ChIP-Seq(SRA014231)/Homer

Match Rank:1
Score:0.63
Offset:2
Orientation:reverse strand
Alignment:TAGTGTCCTGTA
--ATTTCCTGTN

MA0160.1_NR4A2/Jaspar

Match Rank:2
Score:0.62
Offset:2
Orientation:reverse strand
Alignment:TAGTGTCCTGTA
--GTGACCTT--

EWS:ERG-fusion(ETS)/CADO_ES1-EWS:ERG-ChIP-Seq(SRA014231)/Homer

Match Rank:3
Score:0.61
Offset:2
Orientation:forward strand
Alignment:TAGTGTCCTGTA
--ATTTCCTGTN

MA0071.1_RORA_1/Jaspar

Match Rank:4
Score:0.57
Offset:3
Orientation:reverse strand
Alignment:TAGTGTCCTGTA-
---TGACCTTGAT

MF0004.1_Nuclear_Receptor_class/Jaspar

Match Rank:5
Score:0.57
Offset:3
Orientation:reverse strand
Alignment:TAGTGTCCTGTA
---TGACCT---

ERG(ETS)/VCaP-ERG-ChIP-Seq(GSE14097)/Homer

Match Rank:6
Score:0.56
Offset:1
Orientation:reverse strand
Alignment:TAGTGTCCTGTA
-CACTTCCTGT-

Ets1-distal(ETS)/CD4+-PolII-ChIP-Seq(Barski et al.)/Homer

Match Rank:7
Score:0.56
Offset:2
Orientation:reverse strand
Alignment:TAGTGTCCTGTA
--ACTTCCTGTT

POL009.1_DCE_S_II/Jaspar

Match Rank:8
Score:0.56
Offset:6
Orientation:forward strand
Alignment:TAGTGTCCTGTA
------GCTGTG

PRDM14(Zf)/H1-PRDM14-ChIP-Seq(GSE22767)/Homer

Match Rank:9
Score:0.56
Offset:-3
Orientation:reverse strand
Alignment:---TAGTGTCCTGTA
GGTTAGAGACCT---

PB0208.1_Zscan4_2/Jaspar

Match Rank:10
Score:0.55
Offset:-4
Orientation:reverse strand
Alignment:----TAGTGTCCTGTA
NNNNTTGTGTGCTTNN