Information for motif25


Reverse Opposite:

p-value:1e-42
log p-value:-9.817e+01
Information Content per bp:1.787
Number of Target Sequences with motif83.0
Percentage of Target Sequences with motif0.30%
Number of Background Sequences with motif11.9
Percentage of Background Sequences with motif0.04%
Average Position of motif in Targets85.6 +/- 53.7bp
Average Position of motif in Background109.5 +/- 54.4bp
Strand Bias (log2 ratio + to - strand density)-0.3
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0094.1_Zfp128_1/Jaspar

Match Rank:1
Score:0.75
Offset:-3
Orientation:forward strand
Alignment:---KGGCCGYACC----
TCTTTGGCGTACCCTAA

PB0143.1_Klf7_2/Jaspar

Match Rank:2
Score:0.63
Offset:-4
Orientation:reverse strand
Alignment:----KGGCCGYACC---
NNNTNGGGCGTATNNTN

POL011.1_XCPE1/Jaspar

Match Rank:3
Score:0.63
Offset:0
Orientation:forward strand
Alignment:KGGCCGYACC
GGGCGGGACC

PB0156.1_Plagl1_2/Jaspar

Match Rank:4
Score:0.61
Offset:-3
Orientation:forward strand
Alignment:---KGGCCGYACC----
GCTGGGGGGTACCCCTT

EKLF(Zf)/Erythrocyte-Klf1-ChIP-Seq(GSE20478)/Homer

Match Rank:5
Score:0.60
Offset:1
Orientation:reverse strand
Alignment:KGGCCGYACC---
-GGCCACACCCAN

Klf4(Zf)/mES-Klf4-ChIP-Seq(GSE11431)/Homer

Match Rank:6
Score:0.59
Offset:2
Orientation:forward strand
Alignment:KGGCCGYACC--
--GCCACACCCA

ZNF711(Zf)/SH-SY5Y-ZNF711-ChIP-Seq(GSE20673)/Homer

Match Rank:7
Score:0.57
Offset:-2
Orientation:reverse strand
Alignment:--KGGCCGYACC
CTAGGCCT----

MA0493.1_Klf1/Jaspar

Match Rank:8
Score:0.57
Offset:1
Orientation:forward strand
Alignment:KGGCCGYACC--
-GGCCACACCCA

KLF5(Zf)/LoVo-KLF5-ChIP-Seq(GSE49402)/Homer

Match Rank:9
Score:0.57
Offset:2
Orientation:reverse strand
Alignment:KGGCCGYACC--
--GCCMCRCCCH

MA0146.2_Zfx/Jaspar

Match Rank:10
Score:0.57
Offset:-1
Orientation:reverse strand
Alignment:-KGGCCGYACC---
CAGGCCNNGGCCNN