Information for motif8


Reverse Opposite:

p-value:1e-98
log p-value:-2.258e+02
Information Content per bp:1.686
Number of Target Sequences with motif3017.0
Percentage of Target Sequences with motif11.06%
Number of Background Sequences with motif2024.0
Percentage of Background Sequences with motif7.49%
Average Position of motif in Targets99.8 +/- 56.3bp
Average Position of motif in Background96.6 +/- 59.0bp
Strand Bias (log2 ratio + to - strand density)-0.0
Multiplicity (# of sites on avg that occur together)1.05
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0049.1_Nr2f2_1/Jaspar

Match Rank:1
Score:0.70
Offset:-4
Orientation:reverse strand
Alignment:----CGMCCTYT----
NNNNTGACCTTTNNNN

PB0053.1_Rara_1/Jaspar

Match Rank:2
Score:0.69
Offset:-4
Orientation:reverse strand
Alignment:----CGMCCTYT----
NNNGTGACCTTTGNNN

Nur77(NR)/K562-NR4A1-ChIP-Seq(GSE31363)/Homer

Match Rank:3
Score:0.68
Offset:0
Orientation:forward strand
Alignment:CGMCCTYT----
TGACCTTTNCNT

MA0512.1_Rxra/Jaspar

Match Rank:4
Score:0.66
Offset:-2
Orientation:reverse strand
Alignment:--CGMCCTYT-
NCTGACCTTTG

YY1(Zf)/Promoter/Homer

Match Rank:5
Score:0.65
Offset:-2
Orientation:reverse strand
Alignment:--CGMCCTYT--
GCCGCCATCTTG

Erra(NR)/HepG2-Erra-ChIP-Seq(GSE31477)/Homer

Match Rank:6
Score:0.63
Offset:-1
Orientation:reverse strand
Alignment:-CGMCCTYT-
CTGACCTTTG

MA0095.2_YY1/Jaspar

Match Rank:7
Score:0.61
Offset:-2
Orientation:reverse strand
Alignment:--CGMCCTYT--
GCNGCCATCTTG

RXR(NR/DR1)/3T3L1-RXR-ChIP-Seq(GSE13511)/Homer

Match Rank:8
Score:0.60
Offset:0
Orientation:reverse strand
Alignment:CGMCCTYT------
TGACCTTTGCCCTA

PPARE(NR/DR1)/3T3L1-Pparg-ChIP-Seq(GSE13511)/Homer

Match Rank:9
Score:0.60
Offset:0
Orientation:forward strand
Alignment:CGMCCTYT------
TGACCTTTGCCCCA

MA0065.2_PPARG::RXRA/Jaspar

Match Rank:10
Score:0.60
Offset:0
Orientation:reverse strand
Alignment:CGMCCTYT-------
TGACCTTTGCCCTAN