Information for motif22


Reverse Opposite:

p-value:1e-16
log p-value:-3.871e+01
Information Content per bp:1.705
Number of Target Sequences with motif76.0
Percentage of Target Sequences with motif0.53%
Number of Background Sequences with motif59.2
Percentage of Background Sequences with motif0.17%
Average Position of motif in Targets97.2 +/- 54.7bp
Average Position of motif in Background93.0 +/- 50.5bp
Strand Bias (log2 ratio + to - strand density)-0.3
Multiplicity (# of sites on avg that occur together)1.77
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

CRE(bZIP)/Promoter/Homer

Match Rank:1
Score:0.74
Offset:0
Orientation:reverse strand
Alignment:GTGACATCACAG
GTGACGTCACCG

PB0004.1_Atf1_1/Jaspar

Match Rank:2
Score:0.72
Offset:-3
Orientation:reverse strand
Alignment:---GTGACATCACAG-
NCGATGACGTCATCGN

JunD(bZIP)/K562-JunD-ChIP-Seq/Homer

Match Rank:3
Score:0.70
Offset:-2
Orientation:reverse strand
Alignment:--GTGACATCACAG
NGATGACGTCAT--

c-Jun-CRE(bZIP)/K562-cJun-ChIP-Seq(GSE31477)/Homer

Match Rank:4
Score:0.70
Offset:-2
Orientation:reverse strand
Alignment:--GTGACATCACAG
NGATGACGTCAT--

MA0488.1_JUN/Jaspar

Match Rank:5
Score:0.68
Offset:0
Orientation:reverse strand
Alignment:GTGACATCACAG-
ATGACATCATCNN

Atf1(bZIP)/K562-ATF1-ChIP-Seq(GSE31477)/Homer

Match Rank:6
Score:0.68
Offset:-1
Orientation:forward strand
Alignment:-GTGACATCACAG
GATGACGTCA---

PB0038.1_Jundm2_1/Jaspar

Match Rank:7
Score:0.67
Offset:-3
Orientation:reverse strand
Alignment:---GTGACATCACAG-
NCGATGACGTCATCGN

TCFL2(HMG)/K562-TCF7L2-ChIP-Seq(GSE29196)/Homer

Match Rank:8
Score:0.66
Offset:3
Orientation:forward strand
Alignment:GTGACATCACAG-
---ACWTCAAAGG

Tcf4(HMG)/Hct116-Tcf4-ChIP-Seq(SRA012054)/Homer

Match Rank:9
Score:0.66
Offset:3
Orientation:forward strand
Alignment:GTGACATCACAG---
---ACATCAAAGGNA

MA0018.2_CREB1/Jaspar

Match Rank:10
Score:0.66
Offset:1
Orientation:reverse strand
Alignment:GTGACATCACAG
-TGACGTCA---