Information for motif28


Reverse Opposite:

p-value:1e-10
log p-value:-2.450e+01
Information Content per bp:1.953
Number of Target Sequences with motif16.0
Percentage of Target Sequences with motif0.11%
Number of Background Sequences with motif4.5
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets103.9 +/- 56.2bp
Average Position of motif in Background121.5 +/- 46.5bp
Strand Bias (log2 ratio + to - strand density)0.9
Multiplicity (# of sites on avg that occur together)2.67
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

MA0090.1_TEAD1/Jaspar

Match Rank:1
Score:0.66
Offset:0
Orientation:forward strand
Alignment:TGCATCCCTCTG
CACATTCCTCCG

TEAD4(TEA)/Tropoblast-Tead4-ChIP-Seq(GSE37350)/Homer

Match Rank:2
Score:0.59
Offset:1
Orientation:reverse strand
Alignment:TGCATCCCTCTG
-RCATTCCWGG-

PH0137.1_Pitx1/Jaspar

Match Rank:3
Score:0.55
Offset:-4
Orientation:reverse strand
Alignment:----TGCATCCCTCTG-
NTTGTTAATCCCTCTNN

PH0125.1_Obox5_2/Jaspar

Match Rank:4
Score:0.54
Offset:-5
Orientation:forward strand
Alignment:-----TGCATCCCTCTG
GATAATTAATCCCTCTT

Atf4(bZIP)/MEF-Atf4-ChIP-Seq(GSE35681)/Homer

Match Rank:5
Score:0.53
Offset:-2
Orientation:reverse strand
Alignment:--TGCATCCCTCTG
ATTGCATCAK----

MA0081.1_SPIB/Jaspar

Match Rank:6
Score:0.52
Offset:4
Orientation:reverse strand
Alignment:TGCATCCCTCTG
----TTCCTCT-

TEAD(TEA)/Fibroblast-PU.1-ChIP-Seq(Unpublished)/Homer

Match Rank:7
Score:0.52
Offset:1
Orientation:reverse strand
Alignment:TGCATCCCTCTG
-GCATTCCAGN-

PH0123.1_Obox3/Jaspar

Match Rank:8
Score:0.52
Offset:-4
Orientation:reverse strand
Alignment:----TGCATCCCTCTG-
ATAGTTAATCCCCCNNA

MA0111.1_Spz1/Jaspar

Match Rank:9
Score:0.52
Offset:-2
Orientation:reverse strand
Alignment:--TGCATCCCTCTG
GCTGTTACCCT---

MA0461.1_Atoh1/Jaspar

Match Rank:10
Score:0.52
Offset:4
Orientation:reverse strand
Alignment:TGCATCCCTCTG
----GCCATCTG