Information for motif20


Reverse Opposite:

p-value:1e-12
log p-value:-2.934e+01
Information Content per bp:1.530
Number of Target Sequences with motif12.0
Percentage of Target Sequences with motif0.13%
Number of Background Sequences with motif2.3
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets84.7 +/- 50.9bp
Average Position of motif in Background147.7 +/- 19.8bp
Strand Bias (log2 ratio + to - strand density)0.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

MA0030.1_FOXF2/Jaspar

Match Rank:1
Score:0.71
Offset:0
Orientation:reverse strand
Alignment:ATAGTTTACC----
NTTGTTTACGTTNN

PB0017.1_Foxj3_1/Jaspar

Match Rank:2
Score:0.69
Offset:-3
Orientation:reverse strand
Alignment:---ATAGTTTACC----
NNNTTTGTTTACNTTNN

MA0031.1_FOXD1/Jaspar

Match Rank:3
Score:0.67
Offset:1
Orientation:reverse strand
Alignment:ATAGTTTACC
-ATGTTTAC-

FOXP1(Forkhead)/H9-FOXP1-ChIP-Seq(GSE31006)/Homer

Match Rank:4
Score:0.67
Offset:-1
Orientation:forward strand
Alignment:-ATAGTTTACC-
NYYTGTTTACHN

MA0157.1_FOXO3/Jaspar

Match Rank:5
Score:0.67
Offset:2
Orientation:reverse strand
Alignment:ATAGTTTACC
--TGTTTACA

PH0168.1_Hnf1b/Jaspar

Match Rank:6
Score:0.66
Offset:-4
Orientation:reverse strand
Alignment:----ATAGTTTACC---
ANNNCTAGTTAACNGNN

PB0018.1_Foxk1_1/Jaspar

Match Rank:7
Score:0.65
Offset:-3
Orientation:reverse strand
Alignment:---ATAGTTTACC----
NNNTTTGTTTACATTTN

PB0015.1_Foxa2_1/Jaspar

Match Rank:8
Score:0.65
Offset:-3
Orientation:reverse strand
Alignment:---ATAGTTTACC----
NNNTTTGTTTACTTTTN

MA0040.1_Foxq1/Jaspar

Match Rank:9
Score:0.65
Offset:-1
Orientation:forward strand
Alignment:-ATAGTTTACC
TATTGTTTATT

MA0593.1_FOXP2/Jaspar

Match Rank:10
Score:0.64
Offset:0
Orientation:reverse strand
Alignment:ATAGTTTACC-
TNTGTTTACTT