p-value: | 1e-5 |
log p-value: | -1.369e+01 |
Information Content per bp: | 1.530 |
Number of Target Sequences with motif | 11.0 |
Percentage of Target Sequences with motif | 0.08% |
Number of Background Sequences with motif | 4.1 |
Percentage of Background Sequences with motif | 0.01% |
Average Position of motif in Targets | 101.3 +/- 65.4bp |
Average Position of motif in Background | 113.7 +/- 58.0bp |
Strand Bias (log2 ratio + to - strand density) | 2.7 |
Multiplicity (# of sites on avg that occur together) | 2.20 |
Motif File: | file (matrix) reverse opposite |
PDF Format Logos: | forward logo reverse opposite |
PH0040.1_Hmbox1/Jaspar
Match Rank: | 1 |
Score: | 0.69 |
Offset: | -3 |
Orientation: | reverse strand |
Alignment: | ---TGTAACTAGC---- GANGTTAACTAGTTTNN |
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PB0159.1_Rfx4_2/Jaspar
Match Rank: | 2 |
Score: | 0.68 |
Offset: | -2 |
Orientation: | reverse strand |
Alignment: | --TGTAACTAGC--- NNNGTAACTANGNNA |
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PB0155.1_Osr2_2/Jaspar
Match Rank: | 3 |
Score: | 0.66 |
Offset: | -2 |
Orientation: | reverse strand |
Alignment: | --TGTAACTAGC---- NNTGTAGGTAGCANNT |
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PH0168.1_Hnf1b/Jaspar
Match Rank: | 4 |
Score: | 0.65 |
Offset: | -4 |
Orientation: | forward strand |
Alignment: | ----TGTAACTAGC--- AGCTGTTAACTAGCCGT |
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PH0045.1_Hoxa1/Jaspar
Match Rank: | 5 |
Score: | 0.65 |
Offset: | -2 |
Orientation: | reverse strand |
Alignment: | --TGTAACTAGC---- ACGGTAATTAGCTCAG |
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Lhx2(Homeobox)/HFSC-Lhx2-ChIP-Seq(GSE48068)/Homer
Match Rank: | 6 |
Score: | 0.64 |
Offset: | 2 |
Orientation: | forward strand |
Alignment: | TGTAACTAGC --TAATTAGN |
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PH0049.1_Hoxa2/Jaspar
Match Rank: | 7 |
Score: | 0.63 |
Offset: | -2 |
Orientation: | forward strand |
Alignment: | --TGTAACTAGC---- AAGGTAATTAGCTCAT |
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PH0081.1_Pdx1/Jaspar
Match Rank: | 8 |
Score: | 0.62 |
Offset: | -2 |
Orientation: | forward strand |
Alignment: | --TGTAACTAGC---- AAGGTAATTAGCTCAT |
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PH0052.1_Hoxa5/Jaspar
Match Rank: | 9 |
Score: | 0.62 |
Offset: | -2 |
Orientation: | forward strand |
Alignment: | --TGTAACTAGC---- ACGGTAATTAGCTCAG |
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PH0032.1_Evx2/Jaspar
Match Rank: | 10 |
Score: | 0.61 |
Offset: | -3 |
Orientation: | reverse strand |
Alignment: | ---TGTAACTAGC---- ANCGCTAATTAGCGGTN |
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