p-value: | 1e-10 |
log p-value: | -2.362e+01 |
Information Content per bp: | 1.722 |
Number of Target Sequences with motif | 14.0 |
Percentage of Target Sequences with motif | 0.10% |
Number of Background Sequences with motif | 3.8 |
Percentage of Background Sequences with motif | 0.01% |
Average Position of motif in Targets | 103.1 +/- 53.7bp |
Average Position of motif in Background | 74.1 +/- 46.9bp |
Strand Bias (log2 ratio + to - strand density) | 2.0 |
Multiplicity (# of sites on avg that occur together) | 2.50 |
Motif File: | file (matrix) reverse opposite |
PDF Format Logos: | forward logo reverse opposite |
PH0137.1_Pitx1/Jaspar
Match Rank: | 1 |
Score: | 0.62 |
Offset: | -1 |
Orientation: | reverse strand |
Alignment: | -CTTTTACTCCTA---- NTTGTTAATCCCTCTNN |
|

|
|
CRX(Homeobox)/Retina-Crx-ChIP-Seq(GSE20012)/Homer
Match Rank: | 2 |
Score: | 0.60 |
Offset: | 2 |
Orientation: | forward strand |
Alignment: | CTTTTACTCCTA --GCTAATCC-- |
|

|
|
PH0138.1_Pitx2/Jaspar
Match Rank: | 3 |
Score: | 0.58 |
Offset: | -2 |
Orientation: | reverse strand |
Alignment: | --CTTTTACTCCTA--- GNNNATTAATCCCTNCN |
|

|
|
MA0467.1_Crx/Jaspar
Match Rank: | 4 |
Score: | 0.57 |
Offset: | 3 |
Orientation: | reverse strand |
Alignment: | CTTTTACTCCTA-- ---CTAATCCTCTT |
|

|
|
PB0174.1_Sox30_2/Jaspar
Match Rank: | 5 |
Score: | 0.57 |
Offset: | -4 |
Orientation: | reverse strand |
Alignment: | ----CTTTTACTCCTA NCGTATTATAATCNTA |
|

|
|
MA0111.1_Spz1/Jaspar
Match Rank: | 6 |
Score: | 0.57 |
Offset: | -1 |
Orientation: | reverse strand |
Alignment: | -CTTTTACTCCTA GCTGTTACCCT-- |
|

|
|
PH0130.1_Otx2/Jaspar
Match Rank: | 7 |
Score: | 0.56 |
Offset: | -2 |
Orientation: | reverse strand |
Alignment: | --CTTTTACTCCTA--- GANNATTAATCCCTNNN |
|

|
|
PH0123.1_Obox3/Jaspar
Match Rank: | 8 |
Score: | 0.56 |
Offset: | -1 |
Orientation: | reverse strand |
Alignment: | -CTTTTACTCCTA---- ATAGTTAATCCCCCNNA |
|

|
|
PH0129.1_Otx1/Jaspar
Match Rank: | 9 |
Score: | 0.56 |
Offset: | -2 |
Orientation: | reverse strand |
Alignment: | --CTTTTACTCCTA--- NNNAATTAATCCCCNCN |
|

|
|
Pitx1(Homeobox)/Chicken-Pitx1-ChIP-Seq(GSE38910)/Homer
Match Rank: | 10 |
Score: | 0.56 |
Offset: | 4 |
Orientation: | forward strand |
Alignment: | CTTTTACTCCTA ----TAATCCCN |
|

|
|