Information for motif8


Reverse Opposite:

p-value:1e-27
log p-value:-6.248e+01
Information Content per bp:1.931
Number of Target Sequences with motif18.0
Percentage of Target Sequences with motif0.19%
Number of Background Sequences with motif1.3
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets97.1 +/- 49.2bp
Average Position of motif in Background20.0 +/- 0.0bp
Strand Bias (log2 ratio + to - strand density)0.3
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

MA0124.1_NKX3-1/Jaspar

Match Rank:1
Score:0.69
Offset:4
Orientation:forward strand
Alignment:CAGGCTACTTAG
----ATACTTA-

PB0154.1_Osr1_2/Jaspar

Match Rank:2
Score:0.67
Offset:-1
Orientation:forward strand
Alignment:-CAGGCTACTTAG---
ACATGCTACCTAATAC

MA0122.1_Nkx3-2/Jaspar

Match Rank:3
Score:0.65
Offset:3
Orientation:reverse strand
Alignment:CAGGCTACTTAG
---NCCACTTAN

PH0032.1_Evx2/Jaspar

Match Rank:4
Score:0.65
Offset:-1
Orientation:forward strand
Alignment:-CAGGCTACTTAG----
CACCGCTAATTAGCGGT

PH0034.1_Gbx2/Jaspar

Match Rank:5
Score:0.65
Offset:-1
Orientation:reverse strand
Alignment:-CAGGCTACTTAG----
AANCGCTAATTAGCNNN

PH0094.1_Lhx4/Jaspar

Match Rank:6
Score:0.64
Offset:-1
Orientation:reverse strand
Alignment:-CAGGCTACTTAG----
CAAAGCTAATTAGNTTN

PH0098.1_Lhx8/Jaspar

Match Rank:7
Score:0.63
Offset:-1
Orientation:reverse strand
Alignment:-CAGGCTACTTAG----
CACCGCTAATTAGNNGN

PH0131.1_Pax4/Jaspar

Match Rank:8
Score:0.63
Offset:-1
Orientation:reverse strand
Alignment:-CAGGCTACTTAG----
NNGNGCTAATTAGNTNA

PH0155.1_Prrx2/Jaspar

Match Rank:9
Score:0.62
Offset:0
Orientation:forward strand
Alignment:CAGGCTACTTAG-----
AAAGCTAATTAGCGAAA

PH0089.1_Isx/Jaspar

Match Rank:10
Score:0.62
Offset:0
Orientation:forward strand
Alignment:CAGGCTACTTAG----
ACTCCTAATTAGTCGT