DatasetOIS-Specific_collapsed_to_symbols.Cliques.cls#OIS_versus_Pro
PhenotypeCliques.cls#OIS_versus_Pro
Upregulated in classOIS
GeneSetBUYTAERT_PHOTODYNAMIC_THERAPY_STRESS_UP
Enrichment Score (ES)0.56988615
Normalized Enrichment Score (NES)1.6913619
Nominal p-value0.0
FDR q-value0.19679005
FWER p-Value0.477
Table: GSEA Results Summary

Trouble saving image
java.lang.IllegalArgumentException: Must be finite. at jfreechart@1.5.0/org.jfree.chart.axis.NumberTickUnitSource.getCeilingTickUnit(NumberTickUnitSource.java:114) at jfreechart@1.5.0/org.jfree.chart.axis.NumberAxis.selectVerticalAutoTickUnit(NumberAxis.java:896) at jfreechart@1.5.0/org.jfree.chart.axis.NumberAxis.selectAutoTickUnit(NumberAxis.java:828) at jfreechart@1.5.0/org.jfree.chart.axis.NumberAxis.refreshTicksVertical(NumberAxis.java:1049) at jfreechart@1.5.0/org.jfree.chart.axis.NumberAxis.refreshTicks(NumberAxis.java:929) at jfreechart@1.5.0/org.jfree.chart.axis.ValueAxis.reserveSpace(ValueAxis.java:806) at jfreechart@1.5.0/org.jfree.chart.plot.XYPlot.calculateRangeAxisSpace(XYPlot.java:3077) at jfreechart@1.5.0/org.jfree.chart.plot.CombinedDomainXYPlot.calculateAxisSpace(CombinedDomainXYPlot.java:447) at jfreechart@1.5.0/org.jfree.chart.plot.CombinedDomainXYPlot.draw(CombinedDomainXYPlot.java:482) at jfreechart@1.5.0/org.jfree.chart.JFreeChart.draw(JFreeChart.java:1286) at jfreechart@1.5.0/org.jfree.chart.JFreeChart.createBufferedImage(JFreeChart.java:1453) at jfreechart@1.5.0/org.jfree.chart.JFreeChart.createBufferedImage(JFreeChart.java:1434) at jfreechart@1.5.0/org.jfree.chart.ChartUtils.writeChartAsPNG(ChartUtils.java:184) at jfreechart@1.5.0/org.jfree.chart.ChartUtils.saveChartAsPNG(ChartUtils.java:310) at jfreechart@1.5.0/org.jfree.chart.ChartUtils.saveChartAsPNG(ChartUtils.java:285) at org.gsea_msigdb.gsea/edu.mit.broad.genome.charts.XChartImpl.saveAsPNG(XChartImpl.java:114) at org.gsea_msigdb.gsea/edu.mit.broad.genome.reports.api.PicFile.save(PicFile.java:149) at org.gsea_msigdb.gsea/edu.mit.broad.genome.reports.api.PicFile.createIMG(PicFile.java:118) at org.gsea_msigdb.gsea/edu.mit.broad.genome.reports.pages.HtmlPage.addChart(HtmlPage.java:206) at org.gsea_msigdb.gsea/edu.mit.broad.genome.reports.pages.HtmlPage.addChart(HtmlPage.java:213) at org.gsea_msigdb.gsea/edu.mit.broad.genome.reports.EnrichmentReports.createReport(EnrichmentReports.java:785) at org.gsea_msigdb.gsea/edu.mit.broad.genome.reports.EnrichmentReports.createReport(EnrichmentReports.java:613) at org.gsea_msigdb.gsea/edu.mit.broad.genome.reports.EnrichmentReports.createGseaLikeReport(EnrichmentReports.java:330) at org.gsea_msigdb.gsea/edu.mit.broad.genome.reports.EnrichmentReports.createGseaLikeReport(EnrichmentReports.java:179) at org.gsea_msigdb.gsea/xtools.gsea.AbstractGsea2Tool.execute_one_with_reporting(AbstractGsea2Tool.java:124) at org.gsea_msigdb.gsea/xtools.gsea.Gsea.execute(Gsea.java:165) at org.gsea_msigdb.gsea/edu.mit.broad.xbench.tui.TaskManager$ToolRunnable.run(TaskManager.java:435) at java.base/java.lang.Thread.run(Unknown Source)

SYMBOLTITLERANK IN GENE LISTRANK METRIC SCORERUNNING ESCORE ENRICHMENT
1THBDthrombomodulin [Source:HGNC Symbol;Acc:HGNC:11784]46.3900.1135Yes
2NAMPTnicotinamide phosphoribosyltransferase [Source:HGNC Symbol;Acc:HGNC:30092]94.0150.1822Yes
3BMP2bone morphogenetic protein 2 [Source:HGNC Symbol;Acc:HGNC:1069]133.6540.2459Yes
4DUSP5dual specificity phosphatase 5 [Source:HGNC Symbol;Acc:HGNC:3071]243.0520.2857Yes
5SAT1spermidine/spermine N1-acetyltransferase 1 [Source:HGNC Symbol;Acc:HGNC:10540]322.6370.3231Yes
6SPRY2sprouty RTK signaling antagonist 2 [Source:HGNC Symbol;Acc:HGNC:11270]332.6090.3724Yes
7HEY1hes related family bHLH transcription factor with YRPW motif 1 [Source:HGNC Symbol;Acc:HGNC:4880]342.5950.4213Yes
8PSG6pregnancy specific beta-1-glycoprotein 6 [Source:HGNC Symbol;Acc:HGNC:9523]462.2800.4449Yes
9ATP2B1ATPase plasma membrane Ca2+ transporting 1 [Source:HGNC Symbol;Acc:HGNC:814]501.9090.4756Yes
10SLCO4A1solute carrier organic anion transporter family member 4A1 [Source:HGNC Symbol;Acc:HGNC:10953]591.7060.4936Yes
11CHIC2cysteine rich hydrophobic domain 2 [Source:HGNC Symbol;Acc:HGNC:1935]651.6320.5155Yes
12PSG1pregnancy specific beta-1-glycoprotein 1 [Source:HGNC Symbol;Acc:HGNC:9514]761.3390.5231Yes
13GEMGTP binding protein overexpressed in skeletal muscle [Source:HGNC Symbol;Acc:HGNC:4234]771.3330.5482Yes
14PSG7pregnancy specific beta-1-glycoprotein 7 [Source:HGNC Symbol;Acc:HGNC:9524]891.1190.5499Yes
15AHRaryl hydrocarbon receptor [Source:HGNC Symbol;Acc:HGNC:348]960.9880.5579Yes
16CTNS"cystinosin, lysosomal cystine transporter [Source:HGNC Symbol;Acc:HGNC:2518]"1160.8030.5393Yes
17RND3Rho family GTPase 3 [Source:HGNC Symbol;Acc:HGNC:671]1250.7510.5393Yes
18ZMIZ1zinc finger MIZ-type containing 1 [Source:HGNC Symbol;Acc:HGNC:16493]1310.7110.5439Yes
19NRBF2nuclear receptor binding factor 2 [Source:HGNC Symbol;Acc:HGNC:19692]1350.6910.5516Yes
20SKILSKI like proto-oncogene [Source:HGNC Symbol;Acc:HGNC:10897]1360.6860.5646Yes
21KLF10Kruppel like factor 10 [Source:HGNC Symbol;Acc:HGNC:11810]1410.6580.5699Yes
22SIK3SIK family kinase 3 [Source:HGNC Symbol;Acc:HGNC:29165]1690.4710.5309No
23ARL8BADP ribosylation factor like GTPase 8B [Source:HGNC Symbol;Acc:HGNC:25564]1730.4600.5343No
24ZEB2zinc finger E-box binding homeobox 2 [Source:HGNC Symbol;Acc:HGNC:14881]1900.4030.5135No
25YPEL5yippee like 5 [Source:HGNC Symbol;Acc:HGNC:18329]2050.3550.4954No
26NFYAnuclear transcription factor Y subunit alpha [Source:HGNC Symbol;Acc:HGNC:7804]2160.3320.4839No
27CITED2Cbp/p300 interacting transactivator with Glu/Asp rich carboxy-terminal domain 2 [Source:HGNC Symbol;Acc:HGNC:1987]2290.2890.4681No
28OPTNoptineurin [Source:HGNC Symbol;Acc:HGNC:17142]2380.2730.4591No
29ETS2"ETS proto-oncogene 2, transcription factor [Source:HGNC Symbol;Acc:HGNC:3489]"2490.2380.4458No
30RCAN1regulator of calcineurin 1 [Source:HGNC Symbol;Acc:HGNC:3040]2510.2350.4485No
31GTPBP2GTP binding protein 2 [Source:HGNC Symbol;Acc:HGNC:4670]2670.1850.4254No
32DSEdermatan sulfate epimerase [Source:HGNC Symbol;Acc:HGNC:21144]2680.1820.4288No
33TTC33tetratricopeptide repeat domain 33 [Source:HGNC Symbol;Acc:HGNC:29959]2800.1670.4125No
34PLA2G4Aphospholipase A2 group IVA [Source:HGNC Symbol;Acc:HGNC:9035]2880.1510.4029No
35WSB1WD repeat and SOCS box containing 1 [Source:HGNC Symbol;Acc:HGNC:19221]2980.1170.3891No
36AHI1Abelson helper integration site 1 [Source:HGNC Symbol;Acc:HGNC:21575]3080.1000.3751No
37HIPK3homeodomain interacting protein kinase 3 [Source:HGNC Symbol;Acc:HGNC:4915]3230.0540.3513No
38COPS2COP9 signalosome subunit 2 [Source:HGNC Symbol;Acc:HGNC:30747]3490.0010.3069No
39HSPA6heat shock protein family A (Hsp70) member 6 [Source:HGNC Symbol;Acc:HGNC:5239]360-0.0350.2899No
40PJA2praja ring finger ubiquitin ligase 2 [Source:HGNC Symbol;Acc:HGNC:17481]387-0.1300.2462No
41GNAI1G protein subunit alpha i1 [Source:HGNC Symbol;Acc:HGNC:4384]397-0.1710.2335No
42RRAGCRas related GTP binding C [Source:HGNC Symbol;Acc:HGNC:19902]401-0.1990.2320No
43PKD1"polycystin 1, transient receptor potential channel interacting [Source:HGNC Symbol;Acc:HGNC:9008]"409-0.2350.2240No
44NFIL3"nuclear factor, interleukin 3 regulated [Source:HGNC Symbol;Acc:HGNC:7787]"447-0.3490.1650No
45ATF4activating transcription factor 4 [Source:HGNC Symbol;Acc:HGNC:786]472-0.4330.1306No
46BACH1BTB domain and CNC homolog 1 [Source:HGNC Symbol;Acc:HGNC:935]476-0.4500.1338No
47CEP112centrosomal protein 112 [Source:HGNC Symbol;Acc:HGNC:28514]483-0.4810.1322No
48TRIM13tripartite motif containing 13 [Source:HGNC Symbol;Acc:HGNC:9976]487-0.5030.1364No
49NDRG1N-myc downstream regulated 1 [Source:HGNC Symbol;Acc:HGNC:7679]527-0.7160.0808No
50ADAMTS5ADAM metallopeptidase with thrombospondin type 1 motif 5 [Source:HGNC Symbol;Acc:HGNC:221]593-1.721-0.0020No
51CDKN1Ccyclin dependent kinase inhibitor 1C [Source:HGNC Symbol;Acc:HGNC:1786]603-1.9860.0195No
Table: GSEA details [plain text format]



Fig 2: BUYTAERT_PHOTODYNAMIC_THERAPY_STRESS_UP   
Blue-Pink O' Gram in the Space of the Analyzed GeneSet



Fig 3: BUYTAERT_PHOTODYNAMIC_THERAPY_STRESS_UP: Random ES distribution   
Gene set null distribution of ES for BUYTAERT_PHOTODYNAMIC_THERAPY_STRESS_UP