DatasetOIS-Specific_collapsed_to_symbols.Cliques.cls#OIS_versus_Pro
PhenotypeCliques.cls#OIS_versus_Pro
Upregulated in classOIS
GeneSetLEE_BMP2_TARGETS_DN
Enrichment Score (ES)0.48433065
Normalized Enrichment Score (NES)1.7686781
Nominal p-value0.0
FDR q-value0.16500027
FWER p-Value0.165
Table: GSEA Results Summary

Trouble saving image
java.lang.IllegalArgumentException: Must be finite. at jfreechart@1.5.0/org.jfree.chart.axis.NumberTickUnitSource.getCeilingTickUnit(NumberTickUnitSource.java:114) at jfreechart@1.5.0/org.jfree.chart.axis.NumberAxis.selectVerticalAutoTickUnit(NumberAxis.java:896) at jfreechart@1.5.0/org.jfree.chart.axis.NumberAxis.selectAutoTickUnit(NumberAxis.java:828) at jfreechart@1.5.0/org.jfree.chart.axis.NumberAxis.refreshTicksVertical(NumberAxis.java:1049) at jfreechart@1.5.0/org.jfree.chart.axis.NumberAxis.refreshTicks(NumberAxis.java:929) at jfreechart@1.5.0/org.jfree.chart.axis.ValueAxis.reserveSpace(ValueAxis.java:806) at jfreechart@1.5.0/org.jfree.chart.plot.XYPlot.calculateRangeAxisSpace(XYPlot.java:3077) at jfreechart@1.5.0/org.jfree.chart.plot.CombinedDomainXYPlot.calculateAxisSpace(CombinedDomainXYPlot.java:447) at jfreechart@1.5.0/org.jfree.chart.plot.CombinedDomainXYPlot.draw(CombinedDomainXYPlot.java:482) at jfreechart@1.5.0/org.jfree.chart.JFreeChart.draw(JFreeChart.java:1286) at jfreechart@1.5.0/org.jfree.chart.JFreeChart.createBufferedImage(JFreeChart.java:1453) at jfreechart@1.5.0/org.jfree.chart.JFreeChart.createBufferedImage(JFreeChart.java:1434) at jfreechart@1.5.0/org.jfree.chart.ChartUtils.writeChartAsPNG(ChartUtils.java:184) at jfreechart@1.5.0/org.jfree.chart.ChartUtils.saveChartAsPNG(ChartUtils.java:310) at jfreechart@1.5.0/org.jfree.chart.ChartUtils.saveChartAsPNG(ChartUtils.java:285) at org.gsea_msigdb.gsea/edu.mit.broad.genome.charts.XChartImpl.saveAsPNG(XChartImpl.java:114) at org.gsea_msigdb.gsea/edu.mit.broad.genome.reports.api.PicFile.save(PicFile.java:149) at org.gsea_msigdb.gsea/edu.mit.broad.genome.reports.api.PicFile.createIMG(PicFile.java:118) at org.gsea_msigdb.gsea/edu.mit.broad.genome.reports.pages.HtmlPage.addChart(HtmlPage.java:206) at org.gsea_msigdb.gsea/edu.mit.broad.genome.reports.pages.HtmlPage.addChart(HtmlPage.java:213) at org.gsea_msigdb.gsea/edu.mit.broad.genome.reports.EnrichmentReports.createReport(EnrichmentReports.java:785) at org.gsea_msigdb.gsea/edu.mit.broad.genome.reports.EnrichmentReports.createReport(EnrichmentReports.java:613) at org.gsea_msigdb.gsea/edu.mit.broad.genome.reports.EnrichmentReports.createGseaLikeReport(EnrichmentReports.java:330) at org.gsea_msigdb.gsea/edu.mit.broad.genome.reports.EnrichmentReports.createGseaLikeReport(EnrichmentReports.java:179) at org.gsea_msigdb.gsea/xtools.gsea.AbstractGsea2Tool.execute_one_with_reporting(AbstractGsea2Tool.java:124) at org.gsea_msigdb.gsea/xtools.gsea.Gsea.execute(Gsea.java:165) at org.gsea_msigdb.gsea/edu.mit.broad.xbench.tui.TaskManager$ToolRunnable.run(TaskManager.java:435) at java.base/java.lang.Thread.run(Unknown Source)

SYMBOLTITLERANK IN GENE LISTRANK METRIC SCORERUNNING ESCORE ENRICHMENT
1NAMPTnicotinamide phosphoribosyltransferase [Source:HGNC Symbol;Acc:HGNC:30092]94.0150.0992Yes
2BMP2bone morphogenetic protein 2 [Source:HGNC Symbol;Acc:HGNC:1069]133.6540.1987Yes
3E2F7E2F transcription factor 7 [Source:HGNC Symbol;Acc:HGNC:23820]362.5190.2320Yes
4NT5E5'-nucleotidase ecto [Source:HGNC Symbol;Acc:HGNC:8021]482.0670.2718Yes
5RPL12ribosomal protein L12 [Source:HGNC Symbol;Acc:HGNC:10302]821.2470.2492Yes
6SMAD7SMAD family member 7 [Source:HGNC Symbol;Acc:HGNC:6773]861.1910.2780Yes
7AKIRIN1akirin 1 [Source:HGNC Symbol;Acc:HGNC:25744]931.0560.2977Yes
8RPF2ribosome production factor 2 homolog [Source:HGNC Symbol;Acc:HGNC:20870]1110.8950.2932Yes
9RAPH1Ras association (RalGDS/AF-6) and pleckstrin homology domains 1 [Source:HGNC Symbol;Acc:HGNC:14436]1150.8340.3118Yes
10URB1URB1 ribosome biogenesis homolog [Source:HGNC Symbol;Acc:HGNC:17344]1170.8020.3331Yes
11JARID2jumonji and AT-rich interaction domain containing 2 [Source:HGNC Symbol;Acc:HGNC:6196]1190.7870.3539Yes
12RPS24ribosomal protein S24 [Source:HGNC Symbol;Acc:HGNC:10411]1200.7840.3764Yes
13RBM19RNA binding motif protein 19 [Source:HGNC Symbol;Acc:HGNC:29098]1230.7570.3945Yes
14RND3Rho family GTPase 3 [Source:HGNC Symbol;Acc:HGNC:671]1250.7510.4143Yes
15HSPA9heat shock protein family A (Hsp70) member 9 [Source:HGNC Symbol;Acc:HGNC:5244]1270.7440.4339Yes
16ZMIZ1zinc finger MIZ-type containing 1 [Source:HGNC Symbol;Acc:HGNC:16493]1310.7110.4490Yes
17WDR4WD repeat domain 4 [Source:HGNC Symbol;Acc:HGNC:12756]1390.6670.4557Yes
18TOMM20translocase of outer mitochondrial membrane 20 [Source:HGNC Symbol;Acc:HGNC:20947]1430.6320.4685Yes
19SLC41A2solute carrier family 41 member 2 [Source:HGNC Symbol;Acc:HGNC:31045]1450.6120.4843Yes
20NSUN2NOP2/Sun RNA methyltransferase 2 [Source:HGNC Symbol;Acc:HGNC:25994]1860.4210.4256No
21NUDT5nudix hydrolase 5 [Source:HGNC Symbol;Acc:HGNC:8052]1870.4150.4375No
22SLC25A32solute carrier family 25 member 32 [Source:HGNC Symbol;Acc:HGNC:29683]1930.4010.4402No
23HSPA14heat shock protein family A (Hsp70) member 14 [Source:HGNC Symbol;Acc:HGNC:29526]2000.3770.4403No
24AMD1adenosylmethionine decarboxylase 1 [Source:HGNC Symbol;Acc:HGNC:457]2080.3460.4379No
25DNAJA2DnaJ heat shock protein family (Hsp40) member A2 [Source:HGNC Symbol;Acc:HGNC:14884]2310.2870.4072No
26RUNX1RUNX family transcription factor 1 [Source:HGNC Symbol;Acc:HGNC:10471]2360.2770.4081No
27SEH1LSEH1 like nucleoporin [Source:HGNC Symbol;Acc:HGNC:30379]2430.2580.4048No
28TMEM167Atransmembrane protein 167A [Source:HGNC Symbol;Acc:HGNC:28330]2570.2130.3879No
29CRY1cryptochrome circadian regulator 1 [Source:HGNC Symbol;Acc:HGNC:2384]2690.1820.3737No
30GEMIN4gem nuclear organelle associated protein 4 [Source:HGNC Symbol;Acc:HGNC:15717]2950.1260.3330No
31DIS3"DIS3 homolog, exosome endoribonuclease and 3'-5' exoribonuclease [Source:HGNC Symbol;Acc:HGNC:20604]"3120.0800.3070No
32COX10cytochrome c oxidase assembly factor heme A:farnesyltransferase COX10 [Source:HGNC Symbol;Acc:HGNC:2260]3210.0580.2945No
33SNRPA1small nuclear ribonucleoprotein polypeptide A' [Source:HGNC Symbol;Acc:HGNC:11152]3500.0000.2450No
34WDR36WD repeat domain 36 [Source:HGNC Symbol;Acc:HGNC:30696]356-0.0160.2366No
35SLC19A1solute carrier family 19 member 1 [Source:HGNC Symbol;Acc:HGNC:10937]367-0.0400.2200No
36ENOPH1enolase-phosphatase 1 [Source:HGNC Symbol;Acc:HGNC:24599]371-0.0440.2160No
37XPOTexportin for tRNA [Source:HGNC Symbol;Acc:HGNC:12826]391-0.1460.1865No
38ACP1acid phosphatase 1 [Source:HGNC Symbol;Acc:HGNC:122]406-0.2310.1684No
39COPS8COP9 signalosome subunit 8 [Source:HGNC Symbol;Acc:HGNC:24335]415-0.2520.1615No
40MTHFD1Lmethylenetetrahydrofolate dehydrogenase (NADP+ dependent) 1 like [Source:HGNC Symbol;Acc:HGNC:21055]423-0.2710.1569No
41CEP76centrosomal protein 76 [Source:HGNC Symbol;Acc:HGNC:25727]424-0.2740.1647No
42EVA1Ceva-1 homolog C [Source:HGNC Symbol;Acc:HGNC:13239]443-0.3340.1425No
43DNAJB11DnaJ heat shock protein family (Hsp40) member B11 [Source:HGNC Symbol;Acc:HGNC:14889]446-0.3480.1489No
44PFDN4prefoldin subunit 4 [Source:HGNC Symbol;Acc:HGNC:8868]467-0.4150.1254No
45PIM3"Pim-3 proto-oncogene, serine/threonine kinase [Source:HGNC Symbol;Acc:HGNC:19310]"490-0.5120.1012No
46MMACHCmetabolism of cobalamin associated C [Source:HGNC Symbol;Acc:HGNC:24525]492-0.5310.1146No
47FAIMFas apoptotic inhibitory molecule [Source:HGNC Symbol;Acc:HGNC:18703]518-0.6530.0891No
48BAMBIBMP and activin membrane bound inhibitor [Source:HGNC Symbol;Acc:HGNC:30251]521-0.6640.1046No
49YTHDC2YTH domain containing 2 [Source:HGNC Symbol;Acc:HGNC:24721]534-0.7450.1048No
50EXOSC8exosome component 8 [Source:HGNC Symbol;Acc:HGNC:17035]583-1.2230.0549No
Table: GSEA details [plain text format]



Fig 2: LEE_BMP2_TARGETS_DN   
Blue-Pink O' Gram in the Space of the Analyzed GeneSet



Fig 3: LEE_BMP2_TARGETS_DN: Random ES distribution   
Gene set null distribution of ES for LEE_BMP2_TARGETS_DN