Details for gene set OISHI_CHOLANGIOMA_STEM_CELL_LIKE

Table: GSEA Results Summary

Dataset	OIS-Specific_collapsed_to_symbols.Cliques.cls#OIS_versus_Pro
Phenotype	Cliques.cls#OIS_versus_Pro
Upregulated in class	Pro
GeneSet	OISHI_CHOLANGIOMA_STEM_CELL_LIKE_UP
Enrichment Score (ES)	-0.39122143
Normalized Enrichment Score (NES)	-1.2596787
Nominal p-value	0.0
FDR q-value	0.53673565
FWER p-Value	1.0

Trouble saving image
java.lang.IllegalArgumentException: Must be finite. at jfreechart@1.5.0/org.jfree.chart.axis.NumberTickUnitSource.getCeilingTickUnit(NumberTickUnitSource.java:114) at jfreechart@1.5.0/org.jfree.chart.axis.NumberAxis.selectVerticalAutoTickUnit(NumberAxis.java:896) at jfreechart@1.5.0/org.jfree.chart.axis.NumberAxis.selectAutoTickUnit(NumberAxis.java:828) at jfreechart@1.5.0/org.jfree.chart.axis.NumberAxis.refreshTicksVertical(NumberAxis.java:1049) at jfreechart@1.5.0/org.jfree.chart.axis.NumberAxis.refreshTicks(NumberAxis.java:929) at jfreechart@1.5.0/org.jfree.chart.axis.ValueAxis.reserveSpace(ValueAxis.java:806) at jfreechart@1.5.0/org.jfree.chart.plot.XYPlot.calculateRangeAxisSpace(XYPlot.java:3077) at jfreechart@1.5.0/org.jfree.chart.plot.CombinedDomainXYPlot.calculateAxisSpace(CombinedDomainXYPlot.java:447) at jfreechart@1.5.0/org.jfree.chart.plot.CombinedDomainXYPlot.draw(CombinedDomainXYPlot.java:482) at jfreechart@1.5.0/org.jfree.chart.JFreeChart.draw(JFreeChart.java:1286) at jfreechart@1.5.0/org.jfree.chart.JFreeChart.createBufferedImage(JFreeChart.java:1453) at jfreechart@1.5.0/org.jfree.chart.JFreeChart.createBufferedImage(JFreeChart.java:1434) at jfreechart@1.5.0/org.jfree.chart.ChartUtils.writeChartAsPNG(ChartUtils.java:184) at jfreechart@1.5.0/org.jfree.chart.ChartUtils.saveChartAsPNG(ChartUtils.java:310) at jfreechart@1.5.0/org.jfree.chart.ChartUtils.saveChartAsPNG(ChartUtils.java:285) at org.gsea_msigdb.gsea/edu.mit.broad.genome.charts.XChartImpl.saveAsPNG(XChartImpl.java:114) at org.gsea_msigdb.gsea/edu.mit.broad.genome.reports.api.PicFile.save(PicFile.java:149) at org.gsea_msigdb.gsea/edu.mit.broad.genome.reports.api.PicFile.createIMG(PicFile.java:118) at org.gsea_msigdb.gsea/edu.mit.broad.genome.reports.pages.HtmlPage.addChart(HtmlPage.java:206) at org.gsea_msigdb.gsea/edu.mit.broad.genome.reports.pages.HtmlPage.addChart(HtmlPage.java:213) at org.gsea_msigdb.gsea/edu.mit.broad.genome.reports.EnrichmentReports.createReport(EnrichmentReports.java:785) at org.gsea_msigdb.gsea/edu.mit.broad.genome.reports.EnrichmentReports.createReport(EnrichmentReports.java:613) at org.gsea_msigdb.gsea/edu.mit.broad.genome.reports.EnrichmentReports.createGseaLikeReport(EnrichmentReports.java:339) at org.gsea_msigdb.gsea/edu.mit.broad.genome.reports.EnrichmentReports.createGseaLikeReport(EnrichmentReports.java:179) at org.gsea_msigdb.gsea/xtools.gsea.AbstractGsea2Tool.execute_one_with_reporting(AbstractGsea2Tool.java:124) at org.gsea_msigdb.gsea/xtools.gsea.Gsea.execute(Gsea.java:165) at org.gsea_msigdb.gsea/edu.mit.broad.xbench.tui.TaskManager$ToolRunnable.run(TaskManager.java:435) at java.base/java.lang.Thread.run(Unknown Source)

Table: GSEA details [plain text format]
	SYMBOL	TITLE	RANK IN GENE LIST	RANK METRIC SCORE	RUNNING ES	CORE ENRICHMENT
1	ATP13A3	ATPase 13A3 [Source:HGNC Symbol;Acc:HGNC:24113]	102	0.938	-0.0769	No
2	TOMM20	translocase of outer mitochondrial membrane 20 [Source:HGNC Symbol;Acc:HGNC:20947]	143	0.632	-0.0803	No
3	TRIM32	tripartite motif containing 32 [Source:HGNC Symbol;Acc:HGNC:16380]	189	0.404	-0.1153	No
4	TIMM22	translocase of inner mitochondrial membrane 22 [Source:HGNC Symbol;Acc:HGNC:17317]	217	0.324	-0.1280	No
5	MIEF1	mitochondrial elongation factor 1 [Source:HGNC Symbol;Acc:HGNC:25979]	219	0.320	-0.0974	No
6	MAN2A1	mannosidase alpha class 2A member 1 [Source:HGNC Symbol;Acc:HGNC:6824]	241	0.267	-0.1058	No
7	SEH1L	SEH1 like nucleoporin [Source:HGNC Symbol;Acc:HGNC:30379]	243	0.258	-0.0815	No
8	ZNF451	zinc finger protein 451 [Source:HGNC Symbol;Acc:HGNC:21091]	252	0.227	-0.0720	No
9	GEMIN4	gem nuclear organelle associated protein 4 [Source:HGNC Symbol;Acc:HGNC:15717]	295	0.126	-0.1299	No
10	COX10	cytochrome c oxidase assembly factor heme A:farnesyltransferase COX10 [Source:HGNC Symbol;Acc:HGNC:2260]	321	0.058	-0.1660	No
11	MKKS	McKusick-Kaufman syndrome [Source:HGNC Symbol;Acc:HGNC:7108]	357	-0.020	-0.2229	No
12	PRKAA2	protein kinase AMP-activated catalytic subunit alpha 2 [Source:HGNC Symbol;Acc:HGNC:9377]	384	-0.127	-0.2538	No
13	WARS2	"tryptophanyl tRNA synthetase 2, mitochondrial [Source:HGNC Symbol;Acc:HGNC:12730]"	422	-0.270	-0.2887	No
14	RCOR3	REST corepressor 3 [Source:HGNC Symbol;Acc:HGNC:25594]	484	-0.489	-0.3419	Yes
15	KLHL22	kelch like family member 22 [Source:HGNC Symbol;Acc:HGNC:25888]	486	-0.503	-0.2929	Yes
16	SLC38A1	solute carrier family 38 member 1 [Source:HGNC Symbol;Acc:HGNC:13447]	489	-0.511	-0.2447	Yes
17	SCYL3	SCY1 like pseudokinase 3 [Source:HGNC Symbol;Acc:HGNC:19285]	501	-0.574	-0.2053	Yes
18	TMEM209	transmembrane protein 209 [Source:HGNC Symbol;Acc:HGNC:21898]	528	-0.717	-0.1767	Yes
19	YTHDC2	YTH domain containing 2 [Source:HGNC Symbol;Acc:HGNC:24721]	534	-0.745	-0.1099	Yes
20	ZBTB18	zinc finger and BTB domain containing 18 [Source:HGNC Symbol;Acc:HGNC:13030]	608	-2.407	0.0101	Yes