Details for gene set PATIL_LIVER

Table: GSEA Results Summary

Dataset	OIS-Specific_collapsed_to_symbols.Cliques.cls#OIS_versus_Pro
Phenotype	Cliques.cls#OIS_versus_Pro
Upregulated in class	Pro
GeneSet	PATIL_LIVER_CANCER
Enrichment Score (ES)	-0.40834752
Normalized Enrichment Score (NES)	-1.2354724
Nominal p-value	0.0
FDR q-value	0.5117811
FWER p-Value	1.0

Trouble saving image
java.lang.IllegalArgumentException: Must be finite. at jfreechart@1.5.0/org.jfree.chart.axis.NumberTickUnitSource.getCeilingTickUnit(NumberTickUnitSource.java:114) at jfreechart@1.5.0/org.jfree.chart.axis.NumberAxis.selectVerticalAutoTickUnit(NumberAxis.java:896) at jfreechart@1.5.0/org.jfree.chart.axis.NumberAxis.selectAutoTickUnit(NumberAxis.java:828) at jfreechart@1.5.0/org.jfree.chart.axis.NumberAxis.refreshTicksVertical(NumberAxis.java:1049) at jfreechart@1.5.0/org.jfree.chart.axis.NumberAxis.refreshTicks(NumberAxis.java:929) at jfreechart@1.5.0/org.jfree.chart.axis.ValueAxis.reserveSpace(ValueAxis.java:806) at jfreechart@1.5.0/org.jfree.chart.plot.XYPlot.calculateRangeAxisSpace(XYPlot.java:3077) at jfreechart@1.5.0/org.jfree.chart.plot.CombinedDomainXYPlot.calculateAxisSpace(CombinedDomainXYPlot.java:447) at jfreechart@1.5.0/org.jfree.chart.plot.CombinedDomainXYPlot.draw(CombinedDomainXYPlot.java:482) at jfreechart@1.5.0/org.jfree.chart.JFreeChart.draw(JFreeChart.java:1286) at jfreechart@1.5.0/org.jfree.chart.JFreeChart.createBufferedImage(JFreeChart.java:1453) at jfreechart@1.5.0/org.jfree.chart.JFreeChart.createBufferedImage(JFreeChart.java:1434) at jfreechart@1.5.0/org.jfree.chart.ChartUtils.writeChartAsPNG(ChartUtils.java:184) at jfreechart@1.5.0/org.jfree.chart.ChartUtils.saveChartAsPNG(ChartUtils.java:310) at jfreechart@1.5.0/org.jfree.chart.ChartUtils.saveChartAsPNG(ChartUtils.java:285) at org.gsea_msigdb.gsea/edu.mit.broad.genome.charts.XChartImpl.saveAsPNG(XChartImpl.java:114) at org.gsea_msigdb.gsea/edu.mit.broad.genome.reports.api.PicFile.save(PicFile.java:149) at org.gsea_msigdb.gsea/edu.mit.broad.genome.reports.api.PicFile.createIMG(PicFile.java:118) at org.gsea_msigdb.gsea/edu.mit.broad.genome.reports.pages.HtmlPage.addChart(HtmlPage.java:206) at org.gsea_msigdb.gsea/edu.mit.broad.genome.reports.pages.HtmlPage.addChart(HtmlPage.java:213) at org.gsea_msigdb.gsea/edu.mit.broad.genome.reports.EnrichmentReports.createReport(EnrichmentReports.java:785) at org.gsea_msigdb.gsea/edu.mit.broad.genome.reports.EnrichmentReports.createReport(EnrichmentReports.java:613) at org.gsea_msigdb.gsea/edu.mit.broad.genome.reports.EnrichmentReports.createGseaLikeReport(EnrichmentReports.java:339) at org.gsea_msigdb.gsea/edu.mit.broad.genome.reports.EnrichmentReports.createGseaLikeReport(EnrichmentReports.java:179) at org.gsea_msigdb.gsea/xtools.gsea.AbstractGsea2Tool.execute_one_with_reporting(AbstractGsea2Tool.java:124) at org.gsea_msigdb.gsea/xtools.gsea.Gsea.execute(Gsea.java:165) at org.gsea_msigdb.gsea/edu.mit.broad.xbench.tui.TaskManager$ToolRunnable.run(TaskManager.java:435) at java.base/java.lang.Thread.run(Unknown Source)

Table: GSEA details [plain text format]
	SYMBOL	TITLE	RANK IN GENE LIST	RANK METRIC SCORE	RUNNING ES	CORE ENRICHMENT
1	STC1	stanniocalcin 1 [Source:HGNC Symbol;Acc:HGNC:11373]	10	3.706	0.1964	No
2	RGS5	regulator of G protein signaling 5 [Source:HGNC Symbol;Acc:HGNC:10001]	105	0.916	0.0912	No
3	SH3PXD2B	SH3 and PX domains 2B [Source:HGNC Symbol;Acc:HGNC:29242]	132	0.710	0.0883	No
4	SEMA5A	semaphorin 5A [Source:HGNC Symbol;Acc:HGNC:10736]	137	0.681	0.1208	No
5	NFYA	nuclear transcription factor Y subunit alpha [Source:HGNC Symbol;Acc:HGNC:7804]	216	0.332	0.0088	No
6	YWHAZ	tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein zeta [Source:HGNC Symbol;Acc:HGNC:12855]	253	0.225	-0.0388	No
7	CCT5	chaperonin containing TCP1 subunit 5 [Source:HGNC Symbol;Acc:HGNC:1618]	260	0.210	-0.0368	No
8	ZNF706	zinc finger protein 706 [Source:HGNC Symbol;Acc:HGNC:24992]	279	0.170	-0.0572	No
9	ADSL	adenylosuccinate lyase [Source:HGNC Symbol;Acc:HGNC:291]	286	0.156	-0.0583	No
10	RER1	retention in endoplasmic reticulum sorting receptor 1 [Source:HGNC Symbol;Acc:HGNC:30309]	301	0.114	-0.0753	No
11	SNRPA1	small nuclear ribonucleoprotein polypeptide A' [Source:HGNC Symbol;Acc:HGNC:11152]	350	0.000	-0.1560	No
12	XPOT	exportin for tRNA [Source:HGNC Symbol;Acc:HGNC:12826]	391	-0.146	-0.2148	No
13	DUSP12	dual specificity phosphatase 12 [Source:HGNC Symbol;Acc:HGNC:3067]	414	-0.246	-0.2376	No
14	TNPO1	transportin 1 [Source:HGNC Symbol;Acc:HGNC:6401]	417	-0.257	-0.2262	No
15	RBM12B	RNA binding motif protein 12B [Source:HGNC Symbol;Acc:HGNC:32310]	488	-0.509	-0.3145	No
16	NDRG1	N-myc downstream regulated 1 [Source:HGNC Symbol;Acc:HGNC:7679]	527	-0.716	-0.3372	Yes
17	LSM14B	LSM family member 14B [Source:HGNC Symbol;Acc:HGNC:15887]	550	-0.808	-0.3277	Yes
18	KIF23	kinesin family member 23 [Source:HGNC Symbol;Acc:HGNC:6392]	599	-1.898	-0.2991	Yes
19	DLEU2	deleted in lymphocytic leukemia 2 [Source:HGNC Symbol;Acc:HGNC:13748]	609	-2.611	-0.1640	Yes
20	CENPF	centromere protein F [Source:HGNC Symbol;Acc:HGNC:1857]	611	-2.967	0.0050	Yes