Details for gene set MIR29A

Table: GSEA Results Summary

Dataset	OIS-Specific_collapsed_to_symbols.Cliques.cls#OIS_versus_Pro
Phenotype	Cliques.cls#OIS_versus_Pro
Upregulated in class	OIS
GeneSet	MIR29A_3P
Enrichment Score (ES)	0.6244855
Normalized Enrichment Score (NES)	1.6557733
Nominal p-value	0.0
FDR q-value	0.19039114
FWER p-Value	0.353

Trouble saving image
java.lang.IllegalArgumentException: Must be finite. at jfreechart@1.5.0/org.jfree.chart.axis.NumberTickUnitSource.getCeilingTickUnit(NumberTickUnitSource.java:114) at jfreechart@1.5.0/org.jfree.chart.axis.NumberAxis.selectVerticalAutoTickUnit(NumberAxis.java:896) at jfreechart@1.5.0/org.jfree.chart.axis.NumberAxis.selectAutoTickUnit(NumberAxis.java:828) at jfreechart@1.5.0/org.jfree.chart.axis.NumberAxis.refreshTicksVertical(NumberAxis.java:1049) at jfreechart@1.5.0/org.jfree.chart.axis.NumberAxis.refreshTicks(NumberAxis.java:929) at jfreechart@1.5.0/org.jfree.chart.axis.ValueAxis.reserveSpace(ValueAxis.java:806) at jfreechart@1.5.0/org.jfree.chart.plot.XYPlot.calculateRangeAxisSpace(XYPlot.java:3077) at jfreechart@1.5.0/org.jfree.chart.plot.CombinedDomainXYPlot.calculateAxisSpace(CombinedDomainXYPlot.java:447) at jfreechart@1.5.0/org.jfree.chart.plot.CombinedDomainXYPlot.draw(CombinedDomainXYPlot.java:482) at jfreechart@1.5.0/org.jfree.chart.JFreeChart.draw(JFreeChart.java:1286) at jfreechart@1.5.0/org.jfree.chart.JFreeChart.createBufferedImage(JFreeChart.java:1453) at jfreechart@1.5.0/org.jfree.chart.JFreeChart.createBufferedImage(JFreeChart.java:1434) at jfreechart@1.5.0/org.jfree.chart.ChartUtils.writeChartAsPNG(ChartUtils.java:184) at jfreechart@1.5.0/org.jfree.chart.ChartUtils.saveChartAsPNG(ChartUtils.java:310) at jfreechart@1.5.0/org.jfree.chart.ChartUtils.saveChartAsPNG(ChartUtils.java:285) at org.gsea_msigdb.gsea/edu.mit.broad.genome.charts.XChartImpl.saveAsPNG(XChartImpl.java:114) at org.gsea_msigdb.gsea/edu.mit.broad.genome.reports.api.PicFile.save(PicFile.java:149) at org.gsea_msigdb.gsea/edu.mit.broad.genome.reports.api.PicFile.createIMG(PicFile.java:118) at org.gsea_msigdb.gsea/edu.mit.broad.genome.reports.pages.HtmlPage.addChart(HtmlPage.java:206) at org.gsea_msigdb.gsea/edu.mit.broad.genome.reports.pages.HtmlPage.addChart(HtmlPage.java:213) at org.gsea_msigdb.gsea/edu.mit.broad.genome.reports.EnrichmentReports.createReport(EnrichmentReports.java:785) at org.gsea_msigdb.gsea/edu.mit.broad.genome.reports.EnrichmentReports.createReport(EnrichmentReports.java:613) at org.gsea_msigdb.gsea/edu.mit.broad.genome.reports.EnrichmentReports.createGseaLikeReport(EnrichmentReports.java:330) at org.gsea_msigdb.gsea/edu.mit.broad.genome.reports.EnrichmentReports.createGseaLikeReport(EnrichmentReports.java:179) at org.gsea_msigdb.gsea/xtools.gsea.AbstractGsea2Tool.execute_one_with_reporting(AbstractGsea2Tool.java:124) at org.gsea_msigdb.gsea/xtools.gsea.Gsea.execute(Gsea.java:165) at org.gsea_msigdb.gsea/edu.mit.broad.xbench.tui.TaskManager$ToolRunnable.run(TaskManager.java:435) at java.base/java.lang.Thread.run(Unknown Source)

Table: GSEA details [plain text format]
	SYMBOL	TITLE	RANK IN GENE LIST	RANK METRIC SCORE	RUNNING ES	CORE ENRICHMENT
1	TNFAIP3	TNF alpha induced protein 3 [Source:HGNC Symbol;Acc:HGNC:11896]	23	3.066	0.2544	Yes
2	COL25A1	collagen type XXV alpha 1 chain [Source:HGNC Symbol;Acc:HGNC:18603]	72	1.497	0.3174	Yes
3	DTX4	deltex E3 ubiquitin ligase 4 [Source:HGNC Symbol;Acc:HGNC:29151]	112	0.881	0.3365	Yes
4	JARID2	jumonji and AT-rich interaction domain containing 2 [Source:HGNC Symbol;Acc:HGNC:6196]	119	0.787	0.4017	Yes
5	RND3	Rho family GTPase 3 [Source:HGNC Symbol;Acc:HGNC:671]	125	0.751	0.4652	Yes
6	HMCN1	hemicentin 1 [Source:HGNC Symbol;Acc:HGNC:19194]	130	0.714	0.5266	Yes
7	ZMIZ1	zinc finger MIZ-type containing 1 [Source:HGNC Symbol;Acc:HGNC:16493]	131	0.711	0.5946	Yes
8	ERCC6	"ERCC excision repair 6, chromatin remodeling factor [Source:HGNC Symbol;Acc:HGNC:3438]"	166	0.491	0.5848	Yes
9	ZFP91	"ZFP91 zinc finger protein, atypical E3 ubiquitin ligase [Source:HGNC Symbol;Acc:HGNC:14983]"	170	0.468	0.6245	Yes
10	SS18L1	SS18L1 subunit of BAF chromatin remodeling complex [Source:HGNC Symbol;Acc:HGNC:15592]	233	0.281	0.5480	No
11	ERP44	endoplasmic reticulum protein 44 [Source:HGNC Symbol;Acc:HGNC:18311]	248	0.245	0.5481	No
12	HS3ST3B1	heparan sulfate-glucosamine 3-sulfotransferase 3B1 [Source:HGNC Symbol;Acc:HGNC:5198]	341	0.008	0.3955	No
13	OSTC	oligosaccharyltransferase complex non-catalytic subunit [Source:HGNC Symbol;Acc:HGNC:24448]	374	-0.059	0.3478	No
14	PRKG1	protein kinase cGMP-dependent 1 [Source:HGNC Symbol;Acc:HGNC:9414]	392	-0.149	0.3337	No
15	STX17	syntaxin 17 [Source:HGNC Symbol;Acc:HGNC:11432]	450	-0.362	0.2733	No