DatasetPro-Specific_collapsed_to_symbols.Cliques.cls#OIS_versus_Pro
PhenotypeCliques.cls#OIS_versus_Pro
Upregulated in classPro
GeneSetCHARAFE_BREAST_CANCER_LUMINAL_VS_MESENCHYMAL_DN
Enrichment Score (ES)-0.46353468
Normalized Enrichment Score (NES)-1.3638872
Nominal p-value0.0
FDR q-value0.40151978
FWER p-Value0.823
Table: GSEA Results Summary



Fig 1: Enrichment plot: CHARAFE_BREAST_CANCER_LUMINAL_VS_MESENCHYMAL_DN   
Profile of the Running ES Score & Positions of GeneSet Members on the Rank Ordered List

SYMBOLTITLERANK IN GENE LISTRANK METRIC SCORERUNNING ESCORE ENRICHMENT
1RGS4regulator of G protein signaling 4 [Source:HGNC Symbol;Acc:HGNC:10000]71.9470.0553No
2RAB31"RAB31, member RAS oncogene family [Source:HGNC Symbol;Acc:HGNC:9771]"91.6920.1252No
3RAI14retinoic acid induced 14 [Source:HGNC Symbol;Acc:HGNC:14873]250.8950.1000No
4PDGFCplatelet derived growth factor C [Source:HGNC Symbol;Acc:HGNC:8801]450.5430.0423No
5MALT1MALT1 paracaspase [Source:HGNC Symbol;Acc:HGNC:6819]115-0.056-0.2514No
6NAP1L1nucleosome assembly protein 1 like 1 [Source:HGNC Symbol;Acc:HGNC:7637]138-0.208-0.3367No
7GRK5G protein-coupled receptor kinase 5 [Source:HGNC Symbol;Acc:HGNC:4544]152-0.301-0.3793No
8TEAD1TEA domain transcription factor 1 [Source:HGNC Symbol;Acc:HGNC:11714]161-0.384-0.3968No
9PARVAparvin alpha [Source:HGNC Symbol;Acc:HGNC:14652]163-0.401-0.3835No
10CDK6cyclin dependent kinase 6 [Source:HGNC Symbol;Acc:HGNC:1777]164-0.414-0.3653No
11COL4A1collagen type IV alpha 1 chain [Source:HGNC Symbol;Acc:HGNC:2202]171-0.501-0.3691No
12TRAM2translocation associated membrane protein 2 [Source:HGNC Symbol;Acc:HGNC:16855]194-0.735-0.4313Yes
13COL6A3collagen type VI alpha 3 chain [Source:HGNC Symbol;Acc:HGNC:2213]202-0.867-0.4233Yes
14CDH11cadherin 11 [Source:HGNC Symbol;Acc:HGNC:1750]203-0.898-0.3839Yes
15GULP1GULP PTB domain containing engulfment adaptor 1 [Source:HGNC Symbol;Acc:HGNC:18649]207-1.091-0.3490Yes
16ARSJarylsulfatase family member J [Source:HGNC Symbol;Acc:HGNC:26286]208-1.096-0.3009Yes
17TRIOtrio Rho guanine nucleotide exchange factor [Source:HGNC Symbol;Acc:HGNC:12303]224-1.330-0.3070Yes
18BDNFbrain derived neurotrophic factor [Source:HGNC Symbol;Acc:HGNC:1033]226-1.437-0.2483Yes
19CTSCcathepsin C [Source:HGNC Symbol;Acc:HGNC:2528]233-1.677-0.2005Yes
20FSTfollistatin [Source:HGNC Symbol;Acc:HGNC:3971]240-1.963-0.1402Yes
21EPB41L2erythrocyte membrane protein band 4.1 like 2 [Source:HGNC Symbol;Acc:HGNC:3379]241-2.043-0.0507Yes
22FZD7frizzled class receptor 7 [Source:HGNC Symbol;Acc:HGNC:4045]243-2.3310.0472Yes
Table: GSEA details [plain text format]



Fig 2: CHARAFE_BREAST_CANCER_LUMINAL_VS_MESENCHYMAL_DN   
Blue-Pink O' Gram in the Space of the Analyzed GeneSet



Fig 3: CHARAFE_BREAST_CANCER_LUMINAL_VS_MESENCHYMAL_DN: Random ES distribution   
Gene set null distribution of ES for CHARAFE_BREAST_CANCER_LUMINAL_VS_MESENCHYMAL_DN