Information for motif1


Reverse Opposite:

p-value:1e-31
log p-value:-7.222e+01
Information Content per bp:1.661
Number of Target Sequences with motif27.0
Percentage of Target Sequences with motif13.71%
Number of Background Sequences with motif1.9
Percentage of Background Sequences with motif0.79%
Average Position of motif in Targets163.4 +/- 83.9bp
Average Position of motif in Background139.6 +/- 10.8bp
Strand Bias (log2 ratio + to - strand density)0.2
Multiplicity (# of sites on avg that occur together)1.11
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

MyoG(HLH)/C2C12-MyoG-ChIP-Seq(GSE36024)/Homer

Match Rank:1
Score:0.72
Offset:4
Orientation:reverse strand
Alignment:SAGKCAGCTGTG
----CAGCTGTT

POL009.1_DCE_S_II/Jaspar

Match Rank:2
Score:0.70
Offset:6
Orientation:forward strand
Alignment:SAGKCAGCTGTG
------GCTGTG

Ap4(HLH)/AML-Tfap4-ChIP-Seq(GSE45738)/Homer

Match Rank:3
Score:0.70
Offset:1
Orientation:forward strand
Alignment:SAGKCAGCTGTG
-NAHCAGCTGD-

MA0522.1_Tcf3/Jaspar

Match Rank:4
Score:0.69
Offset:1
Orientation:reverse strand
Alignment:SAGKCAGCTGTG
-NTGCAGCTGTG

E2A(HLH)/proBcell-E2A-ChIP-Seq(GSE21978)/Homer

Match Rank:5
Score:0.69
Offset:3
Orientation:reverse strand
Alignment:SAGKCAGCTGTG-
---GCAGCTGTNN

MA0521.1_Tcf12/Jaspar

Match Rank:6
Score:0.69
Offset:1
Orientation:reverse strand
Alignment:SAGKCAGCTGTG
-NNGCAGCTGTT

Myf5(bHLH)/GM-Myf5-ChIP-Seq(GSE24852)/Homer

Match Rank:7
Score:0.68
Offset:3
Orientation:reverse strand
Alignment:SAGKCAGCTGTG-
---ACAGCTGTTV

MA0500.1_Myog/Jaspar

Match Rank:8
Score:0.68
Offset:1
Orientation:reverse strand
Alignment:SAGKCAGCTGTG
-NNGCAGCTGTC

MA0499.1_Myod1/Jaspar

Match Rank:9
Score:0.67
Offset:2
Orientation:forward strand
Alignment:SAGKCAGCTGTG---
--TGCAGCTGTCCCT

Ptf1a(HLH)/Panc1-Ptf1a-ChIP-Seq(GSE47459)/Homer

Match Rank:10
Score:0.67
Offset:1
Orientation:reverse strand
Alignment:SAGKCAGCTGTG
-NAACAGCTGT-