Information for motif10


Reverse Opposite:

p-value:1e-22
log p-value:-5.116e+01
Information Content per bp:1.747
Number of Target Sequences with motif21.0
Percentage of Target Sequences with motif10.66%
Number of Background Sequences with motif1.2
Percentage of Background Sequences with motif0.51%
Average Position of motif in Targets180.8 +/- 83.3bp
Average Position of motif in Background261.0 +/- 0.0bp
Strand Bias (log2 ratio + to - strand density)0.4
Multiplicity (# of sites on avg that occur together)1.05
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

MA0092.1_Hand1::Tcfe2a/Jaspar

Match Rank:1
Score:0.69
Offset:1
Orientation:reverse strand
Alignment:CCATCCAGACTA
-ATGCCAGACN-

Smad2(MAD)/ES-SMAD2-ChIP-Seq(GSE29422)/Homer

Match Rank:2
Score:0.68
Offset:4
Orientation:reverse strand
Alignment:CCATCCAGACTA
----CCAGACAG

PB0060.1_Smad3_1/Jaspar

Match Rank:3
Score:0.66
Offset:-1
Orientation:forward strand
Alignment:-CCATCCAGACTA----
CAAATCCAGACATCACA

Smad3(MAD)/NPC-Smad3-ChIP-Seq(GSE36673)/Homer

Match Rank:4
Score:0.66
Offset:4
Orientation:reverse strand
Alignment:CCATCCAGACTA
----BCAGACWA

Smad4(MAD)/ESC-SMAD4-ChIP-Seq(GSE29422)/Homer

Match Rank:5
Score:0.65
Offset:4
Orientation:reverse strand
Alignment:CCATCCAGACTA--
----CCAGACRSVB

MA0598.1_EHF/Jaspar

Match Rank:6
Score:0.60
Offset:0
Orientation:forward strand
Alignment:CCATCCAGACTA
CCTTCCTG----

TEAD(TEA)/Fibroblast-PU.1-ChIP-Seq(Unpublished)/Homer

Match Rank:7
Score:0.59
Offset:-1
Orientation:reverse strand
Alignment:-CCATCCAGACTA
GCATTCCAGN---

MF0001.1_ETS_class/Jaspar

Match Rank:8
Score:0.56
Offset:1
Orientation:reverse strand
Alignment:CCATCCAGACTA
-CTTCCGGT---

MA0090.1_TEAD1/Jaspar

Match Rank:9
Score:0.55
Offset:-2
Orientation:forward strand
Alignment:--CCATCCAGACTA
CACATTCCTCCG--

TEAD4(TEA)/Tropoblast-Tead4-ChIP-Seq(GSE37350)/Homer

Match Rank:10
Score:0.55
Offset:-1
Orientation:reverse strand
Alignment:-CCATCCAGACTA
RCATTCCWGG---