Information for motif16


Reverse Opposite:

p-value:1e-17
log p-value:-4.131e+01
Information Content per bp:1.743
Number of Target Sequences with motif18.0
Percentage of Target Sequences with motif9.14%
Number of Background Sequences with motif1.3
Percentage of Background Sequences with motif0.55%
Average Position of motif in Targets157.0 +/- 92.0bp
Average Position of motif in Background66.1 +/- 10.4bp
Strand Bias (log2 ratio + to - strand density)0.2
Multiplicity (# of sites on avg that occur together)1.06
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

Erra(NR)/HepG2-Erra-ChIP-Seq(GSE31477)/Homer

Match Rank:1
Score:0.69
Offset:-1
Orientation:reverse strand
Alignment:-AGACCTTTGGCT
CTGACCTTTG---

MA0512.1_Rxra/Jaspar

Match Rank:2
Score:0.68
Offset:-2
Orientation:reverse strand
Alignment:--AGACCTTTGGCT
NCTGACCTTTG---

PB0053.1_Rara_1/Jaspar

Match Rank:3
Score:0.67
Offset:-4
Orientation:reverse strand
Alignment:----AGACCTTTGGCT
NNNGTGACCTTTGNNN

Nur77(NR)/K562-NR4A1-ChIP-Seq(GSE31363)/Homer

Match Rank:4
Score:0.66
Offset:0
Orientation:forward strand
Alignment:AGACCTTTGGCT
TGACCTTTNCNT

PB0049.1_Nr2f2_1/Jaspar

Match Rank:5
Score:0.66
Offset:-4
Orientation:reverse strand
Alignment:----AGACCTTTGGCT
NNNNTGACCTTTNNNN

MA0514.1_Sox3/Jaspar

Match Rank:6
Score:0.66
Offset:3
Orientation:forward strand
Alignment:AGACCTTTGGCT-
---CCTTTGTTTT

PPARE(NR/DR1)/3T3L1-Pparg-ChIP-Seq(GSE13511)/Homer

Match Rank:7
Score:0.65
Offset:0
Orientation:forward strand
Alignment:AGACCTTTGGCT--
TGACCTTTGCCCCA

MA0592.1_ESRRA/Jaspar

Match Rank:8
Score:0.65
Offset:-2
Orientation:reverse strand
Alignment:--AGACCTTTGGCT
NGTGACCTTGG---

MA0141.2_Esrrb/Jaspar

Match Rank:9
Score:0.64
Offset:0
Orientation:reverse strand
Alignment:AGACCTTTGGCT
TGACCTTGANNN

PB0166.1_Sox12_2/Jaspar

Match Rank:10
Score:0.64
Offset:0
Orientation:reverse strand
Alignment:AGACCTTTGGCT----
ANTCCTTTGTCTNNNN