Information for motif18


Reverse Opposite:

p-value:1e-16
log p-value:-3.814e+01
Information Content per bp:1.756
Number of Target Sequences with motif17.0
Percentage of Target Sequences with motif8.63%
Number of Background Sequences with motif0.0
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets119.1 +/- 82.1bp
Average Position of motif in Background0.0 +/- 0.0bp
Strand Bias (log2 ratio + to - strand density)0.3
Multiplicity (# of sites on avg that occur together)1.06
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

TEAD4(TEA)/Tropoblast-Tead4-ChIP-Seq(GSE37350)/Homer

Match Rank:1
Score:0.64
Offset:-3
Orientation:forward strand
Alignment:---GGAATCTCTCTG
CCWGGAATGY-----

TEAD(TEA)/Fibroblast-PU.1-ChIP-Seq(Unpublished)/Homer

Match Rank:2
Score:0.61
Offset:-3
Orientation:forward strand
Alignment:---GGAATCTCTCTG
NCTGGAATGC-----

NFkB-p65-Rel(RHD)/LPS-exp(GSE23622)/Homer

Match Rank:3
Score:0.58
Offset:-1
Orientation:reverse strand
Alignment:-GGAATCTCTCTG
GGGAATTTCC---

MA0090.1_TEAD1/Jaspar

Match Rank:4
Score:0.56
Offset:-4
Orientation:reverse strand
Alignment:----GGAATCTCTCTG
CNGAGGAATGTG----

MA0105.3_NFKB1/Jaspar

Match Rank:5
Score:0.56
Offset:-1
Orientation:forward strand
Alignment:-GGAATCTCTCTG
GGGAATTTCCC--

NFkB-p65(RHD)/GM12787-p65-ChIP-Seq(GSE19485)/Homer

Match Rank:6
Score:0.55
Offset:-1
Orientation:reverse strand
Alignment:-GGAATCTCTCTG
GGGAAATCCCCN-

MA0107.1_RELA/Jaspar

Match Rank:7
Score:0.55
Offset:-1
Orientation:forward strand
Alignment:-GGAATCTCTCTG
GGGAATTTCC---

PB0203.1_Zfp691_2/Jaspar

Match Rank:8
Score:0.55
Offset:-6
Orientation:reverse strand
Alignment:------GGAATCTCTCTG
NTNNNAGGAGTCTCNTN-

MA0101.1_REL/Jaspar

Match Rank:9
Score:0.54
Offset:0
Orientation:reverse strand
Alignment:GGAATCTCTCTG
GGAAANCCCC--

PB0139.1_Irf5_2/Jaspar

Match Rank:10
Score:0.53
Offset:-1
Orientation:reverse strand
Alignment:-GGAATCTCTCTG--
NNAATTCTCGNTNAN