Information for motif23


Reverse Opposite:

p-value:1e-15
log p-value:-3.467e+01
Information Content per bp:1.811
Number of Target Sequences with motif20.0
Percentage of Target Sequences with motif10.15%
Number of Background Sequences with motif2.3
Percentage of Background Sequences with motif0.96%
Average Position of motif in Targets149.8 +/- 88.3bp
Average Position of motif in Background180.8 +/- 62.6bp
Strand Bias (log2 ratio + to - strand density)0.9
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0140.1_Irf6_2/Jaspar

Match Rank:1
Score:0.63
Offset:-3
Orientation:reverse strand
Alignment:---GCCGAGAC----
NNNACCGAGAGTNNN

PB0138.1_Irf4_2/Jaspar

Match Rank:2
Score:0.61
Offset:-3
Orientation:reverse strand
Alignment:---GCCGAGAC----
GNNACCGAGAATNNN

MA0067.1_Pax2/Jaspar

Match Rank:3
Score:0.61
Offset:1
Orientation:reverse strand
Alignment:GCCGAGAC-
-NCGTGACN

Smad2(MAD)/ES-SMAD2-ChIP-Seq(GSE29422)/Homer

Match Rank:4
Score:0.61
Offset:2
Orientation:reverse strand
Alignment:GCCGAGAC--
--CCAGACAG

PB0036.1_Irf6_1/Jaspar

Match Rank:5
Score:0.60
Offset:-3
Orientation:forward strand
Alignment:---GCCGAGAC------
CTGATCGAAACCAAAGT

Smad4(MAD)/ESC-SMAD4-ChIP-Seq(GSE29422)/Homer

Match Rank:6
Score:0.58
Offset:2
Orientation:reverse strand
Alignment:GCCGAGAC----
--CCAGACRSVB

Gfi1b(Zf)/HPC7-Gfi1b-ChIP-Seq(GSE22178)/Homer

Match Rank:7
Score:0.58
Offset:0
Orientation:reverse strand
Alignment:GCCGAGAC--
GCAGTGATTT

PB0035.1_Irf5_1/Jaspar

Match Rank:8
Score:0.57
Offset:-4
Orientation:forward strand
Alignment:----GCCGAGAC---
ATAAACCGAAACCAA

Nrf2(bZIP)/Lymphoblast-Nrf2-ChIP-Seq(GSE37589)/Homer

Match Rank:9
Score:0.56
Offset:-2
Orientation:forward strand
Alignment:--GCCGAGAC--
HTGCTGAGTCAT

PB0117.1_Eomes_2/Jaspar

Match Rank:10
Score:0.56
Offset:-2
Orientation:reverse strand
Alignment:--GCCGAGAC------
NNGGCGACACCTCNNN