Information for motif26


Reverse Opposite:

p-value:1e-13
log p-value:-3.208e+01
Information Content per bp:1.956
Number of Target Sequences with motif19.0
Percentage of Target Sequences with motif9.64%
Number of Background Sequences with motif2.5
Percentage of Background Sequences with motif1.06%
Average Position of motif in Targets136.8 +/- 91.5bp
Average Position of motif in Background151.7 +/- 14.0bp
Strand Bias (log2 ratio + to - strand density)-0.9
Multiplicity (# of sites on avg that occur together)1.06
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0092.1_Zbtb7b_1/Jaspar

Match Rank:1
Score:0.67
Offset:-1
Orientation:reverse strand
Alignment:-TTTTAAGGGG----
ATTTTNGGGGGGCNN

Unknown(Homeobox)/Limb-p300-ChIP-Seq/Homer

Match Rank:2
Score:0.67
Offset:0
Orientation:reverse strand
Alignment:TTTTAAGGGG
TTTAATTGCN

TATA-Box(TBP)/Promoter/Homer

Match Rank:3
Score:0.67
Offset:-2
Orientation:forward strand
Alignment:--TTTTAAGGGG
CCTTTTATAGNC

HOXD13(Homeobox)/Chicken-Hoxd13-ChIP-Seq(GSE38910)/Homer

Match Rank:4
Score:0.67
Offset:0
Orientation:reverse strand
Alignment:TTTTAAGGGG
TTTTATTRGN

PH0114.1_Nkx2-5/Jaspar

Match Rank:5
Score:0.66
Offset:-2
Orientation:reverse strand
Alignment:--TTTTAAGGGG----
AAATTCAAGTGGNTTN

PB0048.1_Nkx3-1_1/Jaspar

Match Rank:6
Score:0.66
Offset:-2
Orientation:reverse strand
Alignment:--TTTTAAGGGG-----
NTNNTTAAGTGGNTNAN

PH0115.1_Nkx2-6/Jaspar

Match Rank:7
Score:0.65
Offset:-2
Orientation:reverse strand
Alignment:--TTTTAAGGGG----
AATNTTAAGTGGNTNN

PH0004.1_Nkx3-2/Jaspar

Match Rank:8
Score:0.64
Offset:-2
Orientation:reverse strand
Alignment:--TTTTAAGGGG-----
NTNNTTAAGTGGTTANN

PH0113.1_Nkx2-4/Jaspar

Match Rank:9
Score:0.64
Offset:-2
Orientation:reverse strand
Alignment:--TTTTAAGGGG----
AATTTCAAGTGGCTTN

PH0111.1_Nkx2-2/Jaspar

Match Rank:10
Score:0.63
Offset:-3
Orientation:reverse strand
Alignment:---TTTTAAGGGG----
NANTTTCAAGTGGTTAN