Information for motif27


Reverse Opposite:

p-value:1e-13
log p-value:-3.208e+01
Information Content per bp:1.696
Number of Target Sequences with motif19.0
Percentage of Target Sequences with motif9.64%
Number of Background Sequences with motif2.9
Percentage of Background Sequences with motif1.21%
Average Position of motif in Targets145.4 +/- 80.4bp
Average Position of motif in Background92.8 +/- 75.7bp
Strand Bias (log2 ratio + to - strand density)1.1
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

POL002.1_INR/Jaspar

Match Rank:1
Score:0.60
Offset:4
Orientation:forward strand
Alignment:DTCCTCABGTYT
----TCAGTCTT

Six1(Homeobox)/Myoblast-Six1-ChIP-Chip(GSE20150)/Homer

Match Rank:2
Score:0.55
Offset:1
Orientation:forward strand
Alignment:DTCCTCABGTYT-
-GKVTCADRTTWC

MA0524.1_TFAP2C/Jaspar

Match Rank:3
Score:0.55
Offset:-3
Orientation:forward strand
Alignment:---DTCCTCABGTYT
CATGGCCCCAGGGCA

Rbpj1(?)/Panc1-Rbpj1-ChIP-Seq(GSE47459)/Homer

Match Rank:4
Score:0.55
Offset:-1
Orientation:forward strand
Alignment:-DTCCTCABGTYT
HTTTCCCASG---

MA0089.1_NFE2L1::MafG/Jaspar

Match Rank:5
Score:0.52
Offset:3
Orientation:reverse strand
Alignment:DTCCTCABGTYT
---GTCATN---

AP-2alpha(AP2)/Hela-AP2alpha-ChIP-Seq(GSE31477)/Homer

Match Rank:6
Score:0.52
Offset:1
Orientation:reverse strand
Alignment:DTCCTCABGTYT-
-GCCTCAGGGCAT

MA0003.2_TFAP2A/Jaspar

Match Rank:7
Score:0.51
Offset:-3
Orientation:forward strand
Alignment:---DTCCTCABGTYT
CATTGCCTCAGGGCA

PB0024.1_Gcm1_1/Jaspar

Match Rank:8
Score:0.51
Offset:-4
Orientation:forward strand
Alignment:----DTCCTCABGTYT
TCGTACCCGCATCATT

MA0056.1_MZF1_1-4/Jaspar

Match Rank:9
Score:0.51
Offset:1
Orientation:reverse strand
Alignment:DTCCTCABGTYT
-TCCCCA-----

MA0081.1_SPIB/Jaspar

Match Rank:10
Score:0.51
Offset:0
Orientation:reverse strand
Alignment:DTCCTCABGTYT
TTCCTCT-----